Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm16399-201ENSMUST00000181423 219 ntBASIC0.22□□□□□ -2.37
Col7a1Q63870 Gm21937-201ENSMUST00000222825 218 ntBASIC0.22□□□□□ -2.37
Col7a1Q63870 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
Col7a1Q63870 Gm25853-201ENSMUST00000082793 132 ntBASIC0.22□□□□□ -2.37
Col7a1Q63870 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.22□□□□□ -2.37
Col7a1Q63870 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Col7a1Q63870 Gm8217-201ENSMUST00000119136 465 ntBASIC0.22□□□□□ -2.37
Col7a1Q63870 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.22□□□□□ -2.37
Col7a1Q63870 Snora81-201ENSMUST00000157310 178 ntBASIC0.22□□□□□ -2.37
Col7a1Q63870 Gm26152-201ENSMUST00000157427 101 ntBASIC0.22□□□□□ -2.37
Col7a1Q63870 Mir1949-201ENSMUST00000157434 141 ntBASIC0.22□□□□□ -2.37
Col7a1Q63870 Gm22607-201ENSMUST00000158291 105 ntBASIC0.22□□□□□ -2.37
Col7a1Q63870 Gm7858-201ENSMUST00000190177 622 ntBASIC0.22□□□□□ -2.37
Col7a1Q63870 AC134254.5-201ENSMUST00000223436 400 ntBASIC0.22□□□□□ -2.37
Col7a1Q63870 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Col7a1Q63870 Mir653-201ENSMUST00000102402 85 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Gm29389-201ENSMUST00000191562 352 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.21□□□□□ -2.38
Col7a1Q63870 Gm19855-201ENSMUST00000210145 249 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Col7a1Q63870 Mir208a-201ENSMUST00000083498 83 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Gm12636-201ENSMUST00000117395 624 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Gm12797-201ENSMUST00000118645 273 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
Col7a1Q63870 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Col7a1Q63870 Gm24911-201ENSMUST00000157292 136 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Gm22519-201ENSMUST00000158270 178 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Col7a1Q63870 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Gm36946-201ENSMUST00000192706 435 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Gm44803-201ENSMUST00000204384 156 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Gm19140-201ENSMUST00000209790 421 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Gm25788-201ENSMUST00000082721 131 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Gm25099-201ENSMUST00000093716 116 ntBASIC0.21□□□□□ -2.38
Col7a1Q63870 Gm23907-201ENSMUST00000104595 189 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm12368-201ENSMUST00000122251 434 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm22477-201ENSMUST00000122569 316 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm16289-201ENSMUST00000162079 183 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
Col7a1Q63870 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm23053-201ENSMUST00000175136 96 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm36966-201ENSMUST00000192217 413 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm43432-201ENSMUST00000196352 121 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm42796-201ENSMUST00000199913 1087 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm14624-201ENSMUST00000117746 192 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Mup-ps21-201ENSMUST00000119998 448 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm12086-201ENSMUST00000120863 228 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm22560-201ENSMUST00000157332 120 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Traj60-201ENSMUST00000167781 54 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm28439-201ENSMUST00000187714 876 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm42807-201ENSMUST00000200141 329 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Mir6964-201ENSMUST00000200252 59 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm44794-201ENSMUST00000206550 411 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm23247-201ENSMUST00000083373 107 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm5583-201ENSMUST00000174328 1519 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm24951-201ENSMUST00000102182 109 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm11797-201ENSMUST00000121336 754 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm6956-201ENSMUST00000134724 546 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm24221-201ENSMUST00000158833 313 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm18354-201ENSMUST00000173515 1068 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm25035-201ENSMUST00000175414 77 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm5116-201ENSMUST00000187732 463 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm6003-201ENSMUST00000187903 463 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm29627-201ENSMUST00000187984 463 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm19280-201ENSMUST00000190191 205 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm29573-201ENSMUST00000190291 919 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm37713-201ENSMUST00000191746 198 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm45316-201ENSMUST00000210128 162 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Snora41-201ENSMUST00000082668 132 ntBASIC0.2□□□□□ -2.38
Col7a1Q63870 Gm12889-201ENSMUST00000118684 241 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm23588-201ENSMUST00000157659 99 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm22663-201ENSMUST00000158721 102 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm16404-201ENSMUST00000177739 468 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm7958-201ENSMUST00000178255 468 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm7950-201ENSMUST00000179633 468 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm14598-201ENSMUST00000180109 468 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm14625-201ENSMUST00000180231 468 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Mir6376-201ENSMUST00000185149 131 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Col7a1Q63870 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 AC161758.1-201ENSMUST00000226123 310 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 CT025525.3-201ENSMUST00000228858 366 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm25128-201ENSMUST00000083339 76 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC0.19□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms