Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ift88Q61371 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ift88Q61371 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ift88Q61371 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ift88Q61371 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ift88Q61371 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Ift88Q61371 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm24338-201ENSMUST00000104205 127 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm11935-201ENSMUST00000118608 399 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm14001-201ENSMUST00000118847 247 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm5937-201ENSMUST00000119715 643 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.15□□□□□ -1.91
Ift88Q61371 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ift88Q61371 Gm23829-201ENSMUST00000157392 270 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm22598-201ENSMUST00000157600 127 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm23409-201ENSMUST00000158516 237 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm26092-201ENSMUST00000179798 97 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Mir669a-1-201ENSMUST00000180238 97 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Mir6907-201ENSMUST00000183764 71 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm28058-201ENSMUST00000186421 264 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm5329-201ENSMUST00000186898 463 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm43739-201ENSMUST00000198294 307 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.15□□□□□ -1.91
Ift88Q61371 Mir7227-201ENSMUST00000200408 59 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm44524-201ENSMUST00000203899 271 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm44964-201ENSMUST00000207011 273 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm23679-201ENSMUST00000083161 119 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.15□□□□□ -1.91
Ift88Q61371 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ift88Q61371 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ift88Q61371 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ift88Q61371 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ift88Q61371 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
Ift88Q61371 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Ift88Q61371 Gm22590-201ENSMUST00000104247 128 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm15183-201ENSMUST00000118933 348 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm14881-201ENSMUST00000120366 372 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm26256-201ENSMUST00000122499 186 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm14298-201ENSMUST00000139032 237 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm14389-201ENSMUST00000140453 241 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.14□□□□□ -1.91
Ift88Q61371 Gm16356-201ENSMUST00000143300 169 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.14□□□□□ -1.91
Ift88Q61371 Gm22389-201ENSMUST00000158193 301 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ift88Q61371 Snord93-201ENSMUST00000175580 71 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm27330-201ENSMUST00000184689 132 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm29512-201ENSMUST00000185544 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28110-201ENSMUST00000185782 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28838-201ENSMUST00000186338 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm29057-201ENSMUST00000186468 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm29661-201ENSMUST00000186781 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28737-201ENSMUST00000186808 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm29118-201ENSMUST00000186908 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28433-201ENSMUST00000187085 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm29635-201ENSMUST00000187221 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28759-201ENSMUST00000187621 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28831-201ENSMUST00000187739 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28200-201ENSMUST00000187778 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm29026-201ENSMUST00000187787 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28752-201ENSMUST00000188340 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28797-201ENSMUST00000188543 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28855-201ENSMUST00000188680 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm29378-201ENSMUST00000188723 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28569-201ENSMUST00000188748 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28120-201ENSMUST00000188812 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28369-201ENSMUST00000188993 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm29037-201ENSMUST00000189092 313 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28909-201ENSMUST00000189406 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28705-201ENSMUST00000189548 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28861-201ENSMUST00000189681 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm29180-201ENSMUST00000190003 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28939-201ENSMUST00000190351 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28223-201ENSMUST00000190469 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm29575-201ENSMUST00000190597 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm29092-201ENSMUST00000190768 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm28288-201ENSMUST00000191019 214 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm29469-201ENSMUST00000191448 315 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Gm19202-201ENSMUST00000198096 808 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.14□□□□□ -1.91
Ift88Q61371 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.14□□□□□ -1.91
Ift88Q61371 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.14□□□□□ -1.91
Ift88Q61371 Gm9318-201ENSMUST00000222444 438 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ift88Q61371 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ift88Q61371 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
Ift88Q61371 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ift88Q61371 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ift88Q61371 Gm15101-201ENSMUST00000178818 1502 ntBASIC3.14□□□□□ -1.91
Ift88Q61371 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Ift88Q61371 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Ift88Q61371 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Ift88Q61371 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms