Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.09□□□□□ -1.91
CtcfQ61164 Gm16358-201ENSMUST00000146046 210 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm26099-201ENSMUST00000157248 109 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm22664-201ENSMUST00000158719 105 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm22858-201ENSMUST00000174972 76 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm22853-201ENSMUST00000174974 131 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Mir5624-201ENSMUST00000176635 61 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm24019-201ENSMUST00000178620 107 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm26243-201ENSMUST00000179260 107 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm27330-201ENSMUST00000184689 132 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm36891-201ENSMUST00000191995 655 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm43991-201ENSMUST00000203751 274 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm45616-201ENSMUST00000211711 319 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm45704-201ENSMUST00000212582 403 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 AC138290.2-201ENSMUST00000218822 369 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CtcfQ61164 Gm23296-201ENSMUST00000082555 107 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm24859-201ENSMUST00000082729 107 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.09□□□□□ -1.92
CtcfQ61164 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CtcfQ61164 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CtcfQ61164 n-R5s202-201ENSMUST00000104517 114 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Gm26275-201ENSMUST00000157101 268 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Gm25624-201ENSMUST00000157222 275 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Gm24681-201ENSMUST00000158760 107 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Gm22621-201ENSMUST00000179678 74 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Gm22263-201ENSMUST00000180060 104 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Gm7837-201ENSMUST00000190873 412 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Gm37128-201ENSMUST00000192599 232 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Gm43217-201ENSMUST00000199513 367 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.08□□□□□ -1.92
CtcfQ61164 Gm45772-201ENSMUST00000212961 240 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 AC167229.1-201ENSMUST00000220057 469 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 AC154552.1-201ENSMUST00000222969 202 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 AC165092.3-201ENSMUST00000223602 282 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CtcfQ61164 Gm4945-201ENSMUST00000075152 453 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Mir137-201ENSMUST00000083635 73 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Gm25207-201ENSMUST00000093745 107 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
CtcfQ61164 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.08□□□□□ -1.92
CtcfQ61164 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CtcfQ61164 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CtcfQ61164 Gm13504-201ENSMUST00000117490 316 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm14593-201ENSMUST00000119948 294 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm11388-201ENSMUST00000120908 159 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm24937-201ENSMUST00000122597 134 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm23409-201ENSMUST00000158516 237 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm3104-201ENSMUST00000171004 473 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm24168-201ENSMUST00000178825 107 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm22448-201ENSMUST00000179254 107 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm29597-201ENSMUST00000188035 308 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm18357-201ENSMUST00000188184 580 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.07□□□□□ -1.92
CtcfQ61164 Gm42647-201ENSMUST00000195939 459 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.07□□□□□ -1.92
CtcfQ61164 Mir691-201ENSMUST00000199719 78 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Mir7227-201ENSMUST00000200408 59 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm44966-201ENSMUST00000208096 157 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm9318-201ENSMUST00000222444 438 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm26446-201ENSMUST00000082455 103 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Gm25801-201ENSMUST00000082638 106 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CtcfQ61164 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CtcfQ61164 Gm37642-201ENSMUST00000193166 1735 ntBASIC3.07□□□□□ -1.92
CtcfQ61164 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CtcfQ61164 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CtcfQ61164 Gm26147-201ENSMUST00000104479 114 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Snord98-201ENSMUST00000116819 65 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm11285-201ENSMUST00000118443 322 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm13876-201ENSMUST00000118451 261 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm16021-201ENSMUST00000121176 219 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm23791-201ENSMUST00000122553 293 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CtcfQ61164 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CtcfQ61164 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.06□□□□□ -1.92
CtcfQ61164 Gm26102-201ENSMUST00000157251 284 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm24191-201ENSMUST00000157977 122 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm26041-201ENSMUST00000158148 108 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm26214-201ENSMUST00000158581 107 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm27527-201ENSMUST00000183903 99 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm27245-201ENSMUST00000184385 376 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm30341-201ENSMUST00000194363 289 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.06□□□□□ -1.92
CtcfQ61164 Gm43402-201ENSMUST00000197159 159 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm43739-201ENSMUST00000198294 307 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm45119-201ENSMUST00000207612 199 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Gm44811-201ENSMUST00000209120 228 ntBASIC3.06□□□□□ -1.92
CtcfQ61164 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CtcfQ61164 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms