Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.47□□□□□ -2.33
Trav3-1Q5R1I8 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC0.47□□□□□ -2.33
Trav3-1Q5R1I8 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.47□□□□□ -2.33
Trav3-1Q5R1I8 Gm18729-201ENSMUST00000217230 621 ntBASIC0.47□□□□□ -2.33
Trav3-1Q5R1I8 Gm45965-201ENSMUST00000221192 1284 ntBASIC0.47□□□□□ -2.33
Trav3-1Q5R1I8 Gm22974-201ENSMUST00000083301 103 ntBASIC0.47□□□□□ -2.33
Trav3-1Q5R1I8 Gm24817-201ENSMUST00000093672 105 ntBASIC0.47□□□□□ -2.33
Trav3-1Q5R1I8 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Trav3-1Q5R1I8 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Trav3-1Q5R1I8 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Trav3-1Q5R1I8 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm22936-201ENSMUST00000103955 126 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm22496-201ENSMUST00000104493 88 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm13433-201ENSMUST00000121701 240 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Mup-ps15-201ENSMUST00000121741 539 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm14366-201ENSMUST00000121970 730 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm23656-201ENSMUST00000122626 112 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm23083-201ENSMUST00000157851 116 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm24366-201ENSMUST00000175383 86 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm22800-201ENSMUST00000175627 94 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm16404-201ENSMUST00000177739 468 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm7958-201ENSMUST00000178255 468 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm25175-201ENSMUST00000178712 79 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm22367-201ENSMUST00000178930 132 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm7950-201ENSMUST00000179633 468 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm14598-201ENSMUST00000180109 468 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm14625-201ENSMUST00000180231 468 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm29492-201ENSMUST00000187124 457 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Ighv1-28-201ENSMUST00000192987 351 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm43427-201ENSMUST00000198188 331 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Gm45878-201ENSMUST00000211839 241 ntBASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.46□□□□□ -2.34
Trav3-1Q5R1I8 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Trav3-1Q5R1I8 Gm24282-201ENSMUST00000104232 66 ntBASIC0.45□□□□□ -2.34
Trav3-1Q5R1I8 Gm4732-201ENSMUST00000118778 473 ntBASIC0.45□□□□□ -2.34
Trav3-1Q5R1I8 Gm26414-201ENSMUST00000157674 269 ntBASIC0.45□□□□□ -2.34
Trav3-1Q5R1I8 Gm26029-201ENSMUST00000158659 132 ntBASIC0.45□□□□□ -2.34
Trav3-1Q5R1I8 Gm23090-201ENSMUST00000177331 78 ntBASIC0.45□□□□□ -2.34
Trav3-1Q5R1I8 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Trav3-1Q5R1I8 Trbv22-201ENSMUST00000191697 291 ntBASIC0.45□□□□□ -2.34
Trav3-1Q5R1I8 Gm42570-201ENSMUST00000195937 292 ntBASIC0.45□□□□□ -2.34
Trav3-1Q5R1I8 Gm35558-202ENSMUST00000221819 499 ntBASIC0.45□□□□□ -2.34
Trav3-1Q5R1I8 CT571268.1-201ENSMUST00000222320 407 ntBASIC0.45□□□□□ -2.34
Trav3-1Q5R1I8 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.45□□□□□ -2.34
Trav3-1Q5R1I8 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.45□□□□□ -2.34
Trav3-1Q5R1I8 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Gm26338-201ENSMUST00000102372 110 ntBASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Gm23836-201ENSMUST00000104434 129 ntBASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Gm13992-201ENSMUST00000120558 156 ntBASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Gm15167-201ENSMUST00000121997 187 ntBASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Gm23865-201ENSMUST00000157723 97 ntBASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Gm22530-201ENSMUST00000158820 118 ntBASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Gm20656-201ENSMUST00000176925 518 ntBASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Gm42647-201ENSMUST00000195939 459 ntBASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Snord1a-201ENSMUST00000083160 74 ntBASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Gm23042-201ENSMUST00000083866 101 ntBASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Trav3-1Q5R1I8 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC0.43□□□□□ -2.34
Trav3-1Q5R1I8 Gm23747-201ENSMUST00000104228 131 ntBASIC0.43□□□□□ -2.34
Trav3-1Q5R1I8 Gm14937-201ENSMUST00000119709 208 ntBASIC0.43□□□□□ -2.34
Trav3-1Q5R1I8 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.43□□□□□ -2.34
Trav3-1Q5R1I8 Gm22136-201ENSMUST00000158751 268 ntBASIC0.43□□□□□ -2.34
Trav3-1Q5R1I8 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC0.43□□□□□ -2.34
Trav3-1Q5R1I8 Gm38167-201ENSMUST00000195704 1178 ntBASIC0.43□□□□□ -2.34
Trav3-1Q5R1I8 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Trav3-1Q5R1I8 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.43□□□□□ -2.34
Trav3-1Q5R1I8 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Trav3-1Q5R1I8 Gm23705-201ENSMUST00000104370 130 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Gm14972-201ENSMUST00000121780 364 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Gm22027-201ENSMUST00000122737 127 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Gm23956-201ENSMUST00000157211 119 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Gm22551-201ENSMUST00000157795 103 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Gm23277-201ENSMUST00000157914 136 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Gm20415-201ENSMUST00000172877 423 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Mir6997-201ENSMUST00000184313 71 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Gm29167-201ENSMUST00000190024 377 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 Gm45590-201ENSMUST00000209715 262 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 AC141642.1-201ENSMUST00000220598 229 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 AC154552.4-201ENSMUST00000222171 151 ntBASIC0.42□□□□□ -2.34
Trav3-1Q5R1I8 AC139294.2-201ENSMUST00000227159 285 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms