Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm9251-201ENSMUST00000197202 628 ntBASIC7.04□□□□□ -1.28
Trim41Q5NCC3 Gm46138-201ENSMUST00000215294 426 ntBASIC7.04□□□□□ -1.28
Trim41Q5NCC3 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim41Q5NCC3 Gm24030-201ENSMUST00000083931 164 ntBASIC7.04□□□□□ -1.28
Trim41Q5NCC3 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim41Q5NCC3 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim41Q5NCC3 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Trim41Q5NCC3 Gm24053-201ENSMUST00000158620 105 ntBASIC7.03□□□□□ -1.28
Trim41Q5NCC3 Gm22889-201ENSMUST00000158639 58 ntBASIC7.03□□□□□ -1.28
Trim41Q5NCC3 Gm29097-201ENSMUST00000190273 422 ntBASIC7.03□□□□□ -1.28
Trim41Q5NCC3 Igkv1-115-201ENSMUST00000198714 302 ntBASIC7.03□□□□□ -1.28
Trim41Q5NCC3 CT025538.3-201ENSMUST00000225279 3848 ntBASIC7.03□□□□□ -1.28
Trim41Q5NCC3 AC127371.1-202ENSMUST00000228923 306 ntBASIC7.03□□□□□ -1.28
Trim41Q5NCC3 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim41Q5NCC3 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim41Q5NCC3 AC121997.2-203ENSMUST00000228613 4192 ntBASIC7.03□□□□□ -1.28
Trim41Q5NCC3 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC7.03□□□□□ -1.28
Trim41Q5NCC3 Gm45393-201ENSMUST00000211634 2631 ntBASIC7.02□□□□□ -1.29
Trim41Q5NCC3 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim41Q5NCC3 Gm15613-201ENSMUST00000118396 326 ntBASIC7.02□□□□□ -1.29
Trim41Q5NCC3 Gm25543-201ENSMUST00000122678 312 ntBASIC7.02□□□□□ -1.29
Trim41Q5NCC3 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim41Q5NCC3 Gm27477-201ENSMUST00000184649 143 ntBASIC7.02□□□□□ -1.29
Trim41Q5NCC3 Gm37545-201ENSMUST00000186512 148 ntBASIC7.02□□□□□ -1.29
Trim41Q5NCC3 Gm28500-201ENSMUST00000190286 151 ntBASIC7.02□□□□□ -1.29
Trim41Q5NCC3 Gm8274-201ENSMUST00000219820 463 ntBASIC7.02□□□□□ -1.29
Trim41Q5NCC3 Gm24929-201ENSMUST00000083403 139 ntBASIC7.02□□□□□ -1.29
Trim41Q5NCC3 Mir370-201ENSMUST00000083499 79 ntBASIC7.02□□□□□ -1.29
Trim41Q5NCC3 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim41Q5NCC3 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim41Q5NCC3 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Gm13852-201ENSMUST00000122350 242 ntBASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Gm22968-201ENSMUST00000157955 118 ntBASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Gm10067-201ENSMUST00000179462 348 ntBASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim41Q5NCC3 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Gm24163-201ENSMUST00000093660 132 ntBASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Trim41Q5NCC3 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim41Q5NCC3 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim41Q5NCC3 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim41Q5NCC3 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC7□□□□□ -1.29
Trim41Q5NCC3 n-R5s150-201ENSMUST00000122705 108 ntBASIC7□□□□□ -1.29
Trim41Q5NCC3 Gm26045-201ENSMUST00000157862 97 ntBASIC7□□□□□ -1.29
Trim41Q5NCC3 Gm44099-201ENSMUST00000203299 112 ntBASIC7□□□□□ -1.29
Trim41Q5NCC3 Gm45116-201ENSMUST00000207392 275 ntBASIC7□□□□□ -1.29
Trim41Q5NCC3 Gm25481-201ENSMUST00000083221 158 ntBASIC7□□□□□ -1.29
Trim41Q5NCC3 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Trim41Q5NCC3 Gm43009-201ENSMUST00000199979 3566 ntBASIC7□□□□□ -1.29
Trim41Q5NCC3 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC7□□□□□ -1.29
Trim41Q5NCC3 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Gm43508-201ENSMUST00000197251 3783 ntBASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Gm23492-201ENSMUST00000116837 115 ntBASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Gm22859-201ENSMUST00000174978 122 ntBASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Gm28755-201ENSMUST00000185773 199 ntBASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Gm5010-201ENSMUST00000213131 260 ntBASIC6.99□□□□□ -1.29
Trim41Q5NCC3 AC154374.1-201ENSMUST00000215351 351 ntBASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Gm23453-201ENSMUST00000083326 106 ntBASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Gm25684-201ENSMUST00000083941 107 ntBASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim41Q5NCC3 AC153964.2-201ENSMUST00000217704 2474 ntBASIC6.99□□□□□ -1.29
Trim41Q5NCC3 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Trim41Q5NCC3 AC156025.1-201ENSMUST00000223597 3551 ntBASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Gm15902-202ENSMUST00000219623 3477 ntBASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Gm23060-201ENSMUST00000102345 109 ntBASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Gm11448-201ENSMUST00000120427 450 ntBASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC6.98□□□□□ -1.29
Trim41Q5NCC3 AC122464.1-201ENSMUST00000202789 770 ntBASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Gm43993-201ENSMUST00000203972 247 ntBASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Gm44519-201ENSMUST00000206486 122 ntBASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Gm36776-201ENSMUST00000207006 203 ntBASIC6.98□□□□□ -1.29
Trim41Q5NCC3 AC160134.1-201ENSMUST00000213450 551 ntBASIC6.98□□□□□ -1.29
Trim41Q5NCC3 AC160962.3-201ENSMUST00000225914 112 ntBASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Gm22620-201ENSMUST00000082700 133 ntBASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim41Q5NCC3 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Trim41Q5NCC3 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim41Q5NCC3 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trim41Q5NCC3 Gm12143-201ENSMUST00000119666 332 ntBASIC6.97□□□□□ -1.29
Trim41Q5NCC3 Gm16186-201ENSMUST00000120132 216 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 172 ms