Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm24908-201ENSMUST00000157294 127 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm22668-201ENSMUST00000158716 260 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm24418-201ENSMUST00000177597 79 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm24639-201ENSMUST00000178518 79 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm23076-201ENSMUST00000179082 79 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm25077-201ENSMUST00000179157 79 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm23963-201ENSMUST00000179603 77 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm27539-201ENSMUST00000184971 224 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm20058-201ENSMUST00000186939 284 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm37557-201ENSMUST00000191640 139 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm37081-201ENSMUST00000192034 196 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm43193-201ENSMUST00000197732 441 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm7039-201ENSMUST00000205138 346 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.03□□□□□ -2.08
Usp28Q5I043 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm18000-201ENSMUST00000212153 800 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Ear14-201ENSMUST00000049559 468 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm24698-201ENSMUST00000083883 130 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Olfr575-201ENSMUST00000084812 957 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.03□□□□□ -2.08
Usp28Q5I043 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.02□□□□□ -2.09
Usp28Q5I043 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Usp28Q5I043 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Usp28Q5I043 Gm25773-201ENSMUST00000116718 127 ntBASIC2.02□□□□□ -2.09
Usp28Q5I043 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Usp28Q5I043 Gm27313-201ENSMUST00000183500 142 ntBASIC2.02□□□□□ -2.09
Usp28Q5I043 Mir7667-201ENSMUST00000183866 63 ntBASIC2.02□□□□□ -2.09
Usp28Q5I043 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Usp28Q5I043 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.02□□□□□ -2.09
Usp28Q5I043 AC116589.1-201ENSMUST00000220634 327 ntBASIC2.02□□□□□ -2.09
Usp28Q5I043 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.02□□□□□ -2.09
Usp28Q5I043 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Usp28Q5I043 Gm25698-201ENSMUST00000082897 107 ntBASIC2.02□□□□□ -2.09
Usp28Q5I043 Mir10a-201ENSMUST00000083585 110 ntBASIC2.02□□□□□ -2.09
Usp28Q5I043 Mir452-201ENSMUST00000093629 85 ntBASIC2.02□□□□□ -2.09
Usp28Q5I043 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Usp28Q5I043 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm42942-201ENSMUST00000196086 1328 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm22270-201ENSMUST00000104034 132 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm22779-201ENSMUST00000104085 107 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm13876-201ENSMUST00000118451 261 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm15443-201ENSMUST00000118947 820 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm12926-201ENSMUST00000121158 409 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm22257-201ENSMUST00000158687 301 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm22666-201ENSMUST00000158717 164 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm21729-201ENSMUST00000180058 664 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm21853-201ENSMUST00000180071 664 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Mir6995-201ENSMUST00000183658 71 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm28489-201ENSMUST00000186655 316 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm29495-201ENSMUST00000189319 664 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm42925-201ENSMUST00000197359 285 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm43708-201ENSMUST00000198857 961 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm44524-201ENSMUST00000203899 271 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm44881-201ENSMUST00000205425 367 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Usp28Q5I043 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.01□□□□□ -2.09
Usp28Q5I043 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 AC112972.1-201ENSMUST00000227329 365 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Gm25402-201ENSMUST00000082966 131 ntBASIC2.01□□□□□ -2.09
Usp28Q5I043 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
Usp28Q5I043 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Usp28Q5I043 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Usp28Q5I043 Gm15029-201ENSMUST00000119742 199 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm15536-201ENSMUST00000121411 114 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm22199-201ENSMUST00000122660 126 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2□□□□□ -2.09
Usp28Q5I043 Trav20-201ENSMUST00000142754 347 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm23713-201ENSMUST00000157353 70 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm22615-201ENSMUST00000158102 70 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm23196-201ENSMUST00000158806 107 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Mir6379-201ENSMUST00000183392 115 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Mir7068-201ENSMUST00000183439 74 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm27236-201ENSMUST00000184147 442 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2□□□□□ -2.09
Usp28Q5I043 Gm9227-201ENSMUST00000194733 566 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm43286-201ENSMUST00000197420 424 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm44870-201ENSMUST00000207291 357 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm18854-201ENSMUST00000211196 329 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm45791-201ENSMUST00000212908 352 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm29809-201ENSMUST00000218423 493 ntBASIC2□□□□□ -2.09
Usp28Q5I043 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2□□□□□ -2.09
Usp28Q5I043 AC165106.2-201ENSMUST00000226749 97 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm25475-201ENSMUST00000082825 180 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Gm22866-201ENSMUST00000083947 177 ntBASIC2□□□□□ -2.09
Usp28Q5I043 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2□□□□□ -2.09
Usp28Q5I043 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Usp28Q5I043 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms