Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm3852-201ENSMUST00000182781 264 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Mir6370-201ENSMUST00000183510 120 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm28358-202ENSMUST00000189292 223 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm44149-201ENSMUST00000204256 226 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm9377-201ENSMUST00000207227 623 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm45730-201ENSMUST00000212560 395 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm23629-201ENSMUST00000082465 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm23924-201ENSMUST00000082474 108 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm22246-201ENSMUST00000082478 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm22749-201ENSMUST00000082490 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm22747-201ENSMUST00000082495 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm23296-201ENSMUST00000082555 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm22063-201ENSMUST00000082560 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm24859-201ENSMUST00000082729 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm23057-201ENSMUST00000082801 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm26328-201ENSMUST00000082821 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm26331-201ENSMUST00000082824 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm22443-201ENSMUST00000082890 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm24205-201ENSMUST00000082953 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm25405-201ENSMUST00000082973 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm22628-201ENSMUST00000082988 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm23242-201ENSMUST00000083055 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm26324-201ENSMUST00000083073 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm24535-201ENSMUST00000083140 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm26496-201ENSMUST00000083150 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm26127-201ENSMUST00000083193 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm24456-201ENSMUST00000083198 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm24458-201ENSMUST00000083204 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm24018-201ENSMUST00000083232 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm25794-201ENSMUST00000083286 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm25790-201ENSMUST00000083293 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm22295-201ENSMUST00000083311 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm25127-201ENSMUST00000083336 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm25583-201ENSMUST00000083413 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm25577-201ENSMUST00000083414 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm24414-201ENSMUST00000083434 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm24861-201ENSMUST00000083459 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm24803-201ENSMUST00000083693 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm23103-201ENSMUST00000083725 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm22580-201ENSMUST00000083727 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm24260-201ENSMUST00000083741 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm23732-201ENSMUST00000083751 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm22682-201ENSMUST00000083854 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm25869-201ENSMUST00000083855 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm24693-201ENSMUST00000083885 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm26317-201ENSMUST00000083894 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm22352-201ENSMUST00000083917 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm24448-201ENSMUST00000083979 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm22798-201ENSMUST00000083992 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm26427-201ENSMUST00000093648 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm22886-201ENSMUST00000093714 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm22170-201ENSMUST00000097247 107 ntBASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trim40Q3UWA4 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm16242-201ENSMUST00000117741 334 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm7327-201ENSMUST00000120925 652 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm13409-201ENSMUST00000122072 546 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm26027-201ENSMUST00000122725 268 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm26280-201ENSMUST00000157096 101 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm23169-201ENSMUST00000157157 112 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm24911-201ENSMUST00000157292 136 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm23586-201ENSMUST00000157657 123 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm24212-201ENSMUST00000158258 132 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm24210-201ENSMUST00000158263 133 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm25490-201ENSMUST00000158734 130 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm21737-201ENSMUST00000178112 664 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm21815-201ENSMUST00000178213 664 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm20874-201ENSMUST00000178356 663 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm22367-201ENSMUST00000178930 132 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm20901-201ENSMUST00000180177 664 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm25528-201ENSMUST00000180264 132 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm28838-201ENSMUST00000186338 315 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm29635-201ENSMUST00000187221 315 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm29026-201ENSMUST00000187787 315 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm28797-201ENSMUST00000188543 315 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm28855-201ENSMUST00000188680 315 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm28705-201ENSMUST00000189548 315 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm21647-201ENSMUST00000189755 664 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm28939-201ENSMUST00000190351 315 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms