Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm29639-201ENSMUST00000188375 580 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm28843-201ENSMUST00000189198 678 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm29546-201ENSMUST00000191171 678 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm37162-201ENSMUST00000191708 551 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm18296-201ENSMUST00000192475 783 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm43245-201ENSMUST00000197603 468 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm43007-201ENSMUST00000197618 291 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm7692-201ENSMUST00000213534 409 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm22572-201ENSMUST00000082985 105 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm14558-201ENSMUST00000117458 381 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm14362-201ENSMUST00000121679 273 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm15254-201ENSMUST00000149567 273 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm23324-201ENSMUST00000157421 131 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm24716-201ENSMUST00000157524 104 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm26414-201ENSMUST00000157674 269 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm22166-201ENSMUST00000178419 121 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm23288-201ENSMUST00000179213 121 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm28597-201ENSMUST00000187664 666 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm33354-201ENSMUST00000195448 906 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm44011-201ENSMUST00000203336 394 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm8940-201ENSMUST00000212585 219 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm26228-201ENSMUST00000082512 107 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm25080-201ENSMUST00000082526 107 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm25518-201ENSMUST00000083864 107 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm22353-201ENSMUST00000083918 136 ntBASIC2.01□□□□□ -2.09
Upf3aQ3ULJ3 Gm44821-201ENSMUST00000208212 2002 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Gm11891-201ENSMUST00000121241 619 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 n-R5s207-201ENSMUST00000122497 118 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Gm22038-201ENSMUST00000157277 242 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Gm24076-201ENSMUST00000158179 94 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Gm23379-201ENSMUST00000180026 107 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Gm18775-201ENSMUST00000190763 586 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Gm18964-201ENSMUST00000193013 563 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Gm37771-201ENSMUST00000193121 265 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2□□□□□ -2.09
Upf3aQ3ULJ3 AC108945.1-201ENSMUST00000226477 94 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Gm36989-201ENSMUST00000193225 2160 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Gm381-201ENSMUST00000117443 2037 ntBASIC2□□□□□ -2.09
Upf3aQ3ULJ3 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm12053-201ENSMUST00000119022 252 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm14638-201ENSMUST00000121338 216 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm14766-201ENSMUST00000121689 367 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm14402-201ENSMUST00000122217 508 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm23956-201ENSMUST00000157211 119 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm22551-201ENSMUST00000157795 103 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm24438-201ENSMUST00000157893 115 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm8114-201ENSMUST00000172225 484 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm8532-201ENSMUST00000179174 461 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm22631-201ENSMUST00000179656 94 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm9892-201ENSMUST00000182415 992 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Mir7667-201ENSMUST00000183866 63 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm27979-201ENSMUST00000185126 56 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm27919-201ENSMUST00000185163 107 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm28825-201ENSMUST00000186233 238 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm28404-201ENSMUST00000190242 453 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm37119-201ENSMUST00000195691 389 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Upf3aQ3ULJ3 Gm22831-201ENSMUST00000102473 109 ntBASIC1.98□□□□□ -2.09
Upf3aQ3ULJ3 Gm22709-201ENSMUST00000116893 111 ntBASIC1.98□□□□□ -2.09
Upf3aQ3ULJ3 Gm25507-201ENSMUST00000116981 144 ntBASIC1.98□□□□□ -2.09
Upf3aQ3ULJ3 Gm12225-201ENSMUST00000117995 298 ntBASIC1.98□□□□□ -2.09
Upf3aQ3ULJ3 Gm24839-201ENSMUST00000122602 107 ntBASIC1.98□□□□□ -2.09
Upf3aQ3ULJ3 Gm25961-201ENSMUST00000157174 135 ntBASIC1.98□□□□□ -2.09
Upf3aQ3ULJ3 Gm7592-201ENSMUST00000160674 627 ntBASIC1.98□□□□□ -2.09
Upf3aQ3ULJ3 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.98□□□□□ -2.09
Upf3aQ3ULJ3 Gm24168-201ENSMUST00000178825 107 ntBASIC1.98□□□□□ -2.09
Upf3aQ3ULJ3 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.98□□□□□ -2.09
Upf3aQ3ULJ3 Gm28000-201ENSMUST00000184380 85 ntBASIC1.98□□□□□ -2.09
Upf3aQ3ULJ3 Mir7021-201ENSMUST00000197026 63 ntBASIC1.98□□□□□ -2.09
Upf3aQ3ULJ3 Gm43978-201ENSMUST00000203491 451 ntBASIC1.98□□□□□ -2.09
Upf3aQ3ULJ3 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms