Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Limch1Q3UH68 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Limch1Q3UH68 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Limch1Q3UH68 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.3□□□□□ -1.72
Limch1Q3UH68 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.3□□□□□ -1.72
Limch1Q3UH68 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
Limch1Q3UH68 AC153526.2-201ENSMUST00000218206 2031 ntBASIC4.3□□□□□ -1.72
Limch1Q3UH68 Gm22779-201ENSMUST00000104085 107 ntBASIC4.3□□□□□ -1.72
Limch1Q3UH68 Gm24244-201ENSMUST00000157317 130 ntBASIC4.3□□□□□ -1.72
Limch1Q3UH68 Gm24997-201ENSMUST00000157910 105 ntBASIC4.3□□□□□ -1.72
Limch1Q3UH68 Gm23257-201ENSMUST00000158322 132 ntBASIC4.3□□□□□ -1.72
Limch1Q3UH68 Gm24676-201ENSMUST00000158758 75 ntBASIC4.3□□□□□ -1.72
Limch1Q3UH68 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Limch1Q3UH68 Gm23966-201ENSMUST00000179823 107 ntBASIC4.3□□□□□ -1.72
Limch1Q3UH68 Gm23571-201ENSMUST00000180073 127 ntBASIC4.3□□□□□ -1.72
Limch1Q3UH68 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.3□□□□□ -1.72
Limch1Q3UH68 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.3□□□□□ -1.72
Limch1Q3UH68 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.3□□□□□ -1.72
Limch1Q3UH68 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Limch1Q3UH68 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Limch1Q3UH68 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Limch1Q3UH68 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Limch1Q3UH68 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Limch1Q3UH68 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Limch1Q3UH68 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Limch1Q3UH68 Gm23472-201ENSMUST00000101806 191 ntBASIC4.29□□□□□ -1.72
Limch1Q3UH68 Gm23957-201ENSMUST00000157209 90 ntBASIC4.29□□□□□ -1.72
Limch1Q3UH68 Gm26001-201ENSMUST00000157989 103 ntBASIC4.29□□□□□ -1.72
Limch1Q3UH68 Gm24497-201ENSMUST00000177868 191 ntBASIC4.29□□□□□ -1.72
Limch1Q3UH68 Gm28627-201ENSMUST00000186141 453 ntBASIC4.29□□□□□ -1.72
Limch1Q3UH68 Gm29452-201ENSMUST00000187996 313 ntBASIC4.29□□□□□ -1.72
Limch1Q3UH68 Gm45907-201ENSMUST00000213023 193 ntBASIC4.29□□□□□ -1.72
Limch1Q3UH68 Gm22620-201ENSMUST00000082700 133 ntBASIC4.29□□□□□ -1.72
Limch1Q3UH68 Gm24356-201ENSMUST00000082859 106 ntBASIC4.29□□□□□ -1.72
Limch1Q3UH68 Gm23444-201ENSMUST00000082922 191 ntBASIC4.29□□□□□ -1.72
Limch1Q3UH68 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Limch1Q3UH68 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Limch1Q3UH68 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Limch1Q3UH68 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Limch1Q3UH68 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.29□□□□□ -1.72
Limch1Q3UH68 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Limch1Q3UH68 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.28□□□□□ -1.72
Limch1Q3UH68 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm6829-201ENSMUST00000119858 360 ntBASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm26171-201ENSMUST00000158422 131 ntBASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm23702-201ENSMUST00000158840 130 ntBASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm27535-201ENSMUST00000183814 157 ntBASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm38238-201ENSMUST00000194334 346 ntBASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm18982-201ENSMUST00000198118 529 ntBASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm9377-201ENSMUST00000207227 623 ntBASIC4.28□□□□□ -1.72
Limch1Q3UH68 Snora31-201ENSMUST00000083213 130 ntBASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm42482-201ENSMUST00000198904 1947 ntBASIC4.28□□□□□ -1.72
Limch1Q3UH68 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.28□□□□□ -1.72
Limch1Q3UH68 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Limch1Q3UH68 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Limch1Q3UH68 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Limch1Q3UH68 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Limch1Q3UH68 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Limch1Q3UH68 Mir872-201ENSMUST00000104728 81 ntBASIC4.27□□□□□ -1.73
Limch1Q3UH68 Gm14803-201ENSMUST00000117163 361 ntBASIC4.27□□□□□ -1.73
Limch1Q3UH68 Gm13432-201ENSMUST00000118861 241 ntBASIC4.27□□□□□ -1.73
Limch1Q3UH68 Gm14922-201ENSMUST00000121131 163 ntBASIC4.27□□□□□ -1.73
Limch1Q3UH68 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.27□□□□□ -1.73
Limch1Q3UH68 Gm26275-201ENSMUST00000157101 268 ntBASIC4.27□□□□□ -1.73
Limch1Q3UH68 Gm23466-201ENSMUST00000157133 106 ntBASIC4.27□□□□□ -1.73
Limch1Q3UH68 Gm25920-201ENSMUST00000158307 99 ntBASIC4.27□□□□□ -1.73
Limch1Q3UH68 Gm24086-201ENSMUST00000175171 98 ntBASIC4.27□□□□□ -1.73
Limch1Q3UH68 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.27□□□□□ -1.73
Limch1Q3UH68 Gm28314-201ENSMUST00000191276 345 ntBASIC4.27□□□□□ -1.73
Limch1Q3UH68 Gm37104-201ENSMUST00000193278 196 ntBASIC4.27□□□□□ -1.73
Limch1Q3UH68 Gm44594-201ENSMUST00000208982 407 ntBASIC4.27□□□□□ -1.73
Limch1Q3UH68 Gm6796-201ENSMUST00000211919 243 ntBASIC4.27□□□□□ -1.73
Limch1Q3UH68 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Limch1Q3UH68 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Limch1Q3UH68 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Limch1Q3UH68 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Limch1Q3UH68 AC117226.1-201ENSMUST00000221635 3737 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Limch1Q3UH68 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Limch1Q3UH68 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Limch1Q3UH68 Gm23990-201ENSMUST00000117031 117 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 Gm25805-201ENSMUST00000122788 108 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 Gm14562-201ENSMUST00000129885 543 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.26□□□□□ -1.73
Limch1Q3UH68 Gm24008-201ENSMUST00000157733 138 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 Gm24726-201ENSMUST00000158232 121 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 Snord92-201ENSMUST00000175548 85 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 Gm28000-201ENSMUST00000184380 85 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 Gm27445-201ENSMUST00000184484 72 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 Gm27520-201ENSMUST00000184872 81 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC4.26□□□□□ -1.73
Limch1Q3UH68 Gm37923-201ENSMUST00000191624 161 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 Gm43193-201ENSMUST00000197732 441 ntBASIC4.26□□□□□ -1.73
Limch1Q3UH68 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC4.26□□□□□ -1.73
Limch1Q3UH68 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms