Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm38109-201ENSMUST00000195386 181 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm20102-201ENSMUST00000222445 220 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm25796-201ENSMUST00000082645 163 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm25698-201ENSMUST00000082897 107 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Mir423-201ENSMUST00000083584 109 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Mir10a-201ENSMUST00000083585 110 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm14020-201ENSMUST00000118165 662 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm13153-201ENSMUST00000120969 637 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm17072-201ENSMUST00000166673 658 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm26430-201ENSMUST00000178054 107 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm29604-201ENSMUST00000187176 163 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm28506-201ENSMUST00000189937 150 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm44083-201ENSMUST00000203114 337 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm44870-201ENSMUST00000207291 357 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm45288-201ENSMUST00000210236 151 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm25130-201ENSMUST00000082650 156 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm23723-201ENSMUST00000082996 132 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm3867-201ENSMUST00000086108 279 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Mir452-201ENSMUST00000093629 85 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
Trafd1Q3UDK1 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm12255-201ENSMUST00000117184 284 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm14355-201ENSMUST00000117352 264 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm13085-201ENSMUST00000118356 171 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm12871-201ENSMUST00000118758 438 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm13433-201ENSMUST00000121701 240 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm24997-201ENSMUST00000157910 105 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm26159-201ENSMUST00000158968 104 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm22093-201ENSMUST00000158980 111 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Mir7093-201ENSMUST00000184195 101 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm28169-201ENSMUST00000190342 345 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm33354-201ENSMUST00000195448 906 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Mir691-201ENSMUST00000199719 78 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 AC154747.1-201ENSMUST00000225265 239 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm23249-201ENSMUST00000083369 161 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm25579-201ENSMUST00000083407 106 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Gm22353-201ENSMUST00000083918 136 ntBASIC2.19□□□□□ -2.06
Trafd1Q3UDK1 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Mir344e-201ENSMUST00000104677 66 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm14852-201ENSMUST00000120065 647 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm12872-201ENSMUST00000121835 320 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm23184-201ENSMUST00000122594 131 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Mir5099-201ENSMUST00000175257 74 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm24813-201ENSMUST00000175310 84 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm38050-201ENSMUST00000191904 238 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm23370-202ENSMUST00000197008 129 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm18341-201ENSMUST00000197538 622 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm19202-201ENSMUST00000198096 808 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm43284-201ENSMUST00000200103 253 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm43600-201ENSMUST00000202134 223 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm44478-201ENSMUST00000204875 114 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm23627-201ENSMUST00000082459 107 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm22502-201ENSMUST00000082488 107 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm22977-201ENSMUST00000082615 107 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Gm24149-201ENSMUST00000082757 107 ntBASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.18□□□□□ -2.06
Trafd1Q3UDK1 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Gm11065-201ENSMUST00000111462 228 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Gm15536-201ENSMUST00000121411 114 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Gm12956-201ENSMUST00000122184 414 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Gm23867-201ENSMUST00000122649 274 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Gm26186-201ENSMUST00000157689 125 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Gm24191-201ENSMUST00000157977 122 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Gm25335-201ENSMUST00000158043 103 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Gm16584-201ENSMUST00000159267 189 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Gm24810-201ENSMUST00000175317 70 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms