Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm25454-201ENSMUST00000157947 315 ntBASIC2.58□□□□□ -2
Brf2Q3UAW9 Gm24736-201ENSMUST00000158862 130 ntBASIC2.58□□□□□ -2
Brf2Q3UAW9 Gm3470-201ENSMUST00000160819 420 ntBASIC2.58□□□□□ -2
Brf2Q3UAW9 Gm3027-201ENSMUST00000167579 451 ntBASIC2.58□□□□□ -2
Brf2Q3UAW9 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.58□□□□□ -2
Brf2Q3UAW9 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.58□□□□□ -2
Brf2Q3UAW9 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.58□□□□□ -2
Brf2Q3UAW9 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Brf2Q3UAW9 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.58□□□□□ -2
Brf2Q3UAW9 Gm37128-201ENSMUST00000192599 232 ntBASIC2.58□□□□□ -2
Brf2Q3UAW9 Gm38109-201ENSMUST00000195386 181 ntBASIC2.58□□□□□ -2
Brf2Q3UAW9 Gm43624-201ENSMUST00000197368 180 ntBASIC2.58□□□□□ -2
Brf2Q3UAW9 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.58□□□□□ -2
Brf2Q3UAW9 Gm24350-202ENSMUST00000198309 132 ntBASIC2.58□□□□□ -2
Brf2Q3UAW9 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.58□□□□□ -2
Brf2Q3UAW9 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.58□□□□□ -2
Brf2Q3UAW9 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.58□□□□□ -2
Brf2Q3UAW9 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.58□□□□□ -2
Brf2Q3UAW9 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Brf2Q3UAW9 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Brf2Q3UAW9 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Brf2Q3UAW9 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Brf2Q3UAW9 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm24172-201ENSMUST00000104127 117 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm24403-201ENSMUST00000104616 130 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm13378-201ENSMUST00000117483 336 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm25945-201ENSMUST00000122484 135 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 DQ267100-201ENSMUST00000122600 72 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm25054-201ENSMUST00000157370 97 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm22654-201ENSMUST00000157874 105 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm25335-201ENSMUST00000158043 103 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm24879-201ENSMUST00000158386 143 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm22416-201ENSMUST00000158590 88 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm25119-201ENSMUST00000158815 88 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm25470-201ENSMUST00000175576 111 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm26180-201ENSMUST00000179942 107 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Mir7242-201ENSMUST00000183710 79 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Mir7658-201ENSMUST00000184043 57 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.57□□□□□ -2
Brf2Q3UAW9 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.57□□□□□ -2
Brf2Q3UAW9 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.57□□□□□ -2
Brf2Q3UAW9 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm26458-201ENSMUST00000082832 128 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.57□□□□□ -2
Brf2Q3UAW9 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.57□□□□□ -2
Brf2Q3UAW9 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.57□□□□□ -2
Brf2Q3UAW9 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Brf2Q3UAW9 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Brf2Q3UAW9 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Brf2Q3UAW9 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Brf2Q3UAW9 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Brf2Q3UAW9 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm14848-201ENSMUST00000121850 467 ntBASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm23331-201ENSMUST00000157423 108 ntBASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm22651-201ENSMUST00000157872 94 ntBASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm16232-201ENSMUST00000162856 167 ntBASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm8338-201ENSMUST00000163928 363 ntBASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm17166-201ENSMUST00000172006 431 ntBASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm29452-201ENSMUST00000187996 313 ntBASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm43472-201ENSMUST00000200175 154 ntBASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm19118-201ENSMUST00000222554 98 ntBASIC2.56□□□□□ -2
Brf2Q3UAW9 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm24623-201ENSMUST00000082616 194 ntBASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm26457-201ENSMUST00000082678 78 ntBASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.56□□□□□ -2
Brf2Q3UAW9 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Brf2Q3UAW9 Gm650-201ENSMUST00000144428 1551 ntBASIC2.56□□□□□ -2
Brf2Q3UAW9 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm24338-201ENSMUST00000104205 127 ntBASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm24376-201ENSMUST00000104399 127 ntBASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm26088-201ENSMUST00000157896 131 ntBASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm24681-201ENSMUST00000158760 107 ntBASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm28358-202ENSMUST00000189292 223 ntBASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm38050-201ENSMUST00000191904 238 ntBASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm44024-201ENSMUST00000203008 476 ntBASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm44844-201ENSMUST00000207242 336 ntBASIC2.55□□□□□ -2
Brf2Q3UAW9 Gm18346-201ENSMUST00000216782 325 ntBASIC2.55□□□□□ -2
Brf2Q3UAW9 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.55□□□□□ -2
Brf2Q3UAW9 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.55□□□□□ -2
Brf2Q3UAW9 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.55□□□□□ -2
Brf2Q3UAW9 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Brf2Q3UAW9 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
Brf2Q3UAW9 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 135.7 ms