Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.79□□□□□ -1.8
Ddb1Q3U1J4 Gm23679-201ENSMUST00000083161 119 ntBASIC3.79□□□□□ -1.8
Ddb1Q3U1J4 Gm23042-201ENSMUST00000083866 101 ntBASIC3.79□□□□□ -1.8
Ddb1Q3U1J4 Gm15101-201ENSMUST00000178818 1502 ntBASIC3.79□□□□□ -1.8
Ddb1Q3U1J4 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 Gm13122-201ENSMUST00000118380 453 ntBASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 Gm13876-201ENSMUST00000118451 261 ntBASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 Gm15936-201ENSMUST00000118706 460 ntBASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 Gm23184-201ENSMUST00000122594 131 ntBASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 Gm22225-201ENSMUST00000157358 278 ntBASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 Gm28650-201ENSMUST00000188413 411 ntBASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 Gm9402-201ENSMUST00000196849 388 ntBASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 Gm23406-201ENSMUST00000082537 122 ntBASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 Mir184-201ENSMUST00000083662 69 ntBASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ddb1Q3U1J4 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
Ddb1Q3U1J4 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Gm14296-202ENSMUST00000108931 750 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Gm25325-201ENSMUST00000122559 86 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Defb44-ps-201ENSMUST00000126871 219 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Gm27926-201ENSMUST00000157180 66 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Gm26102-201ENSMUST00000157251 284 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Gm24879-201ENSMUST00000158386 143 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Gm26400-201ENSMUST00000175012 85 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Gm24085-201ENSMUST00000175172 116 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Gm23047-201ENSMUST00000177661 94 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Gm7258-201ENSMUST00000179317 300 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Gm28002-201ENSMUST00000184832 100 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Gm44520-201ENSMUST00000205447 802 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 CT030170.3-201ENSMUST00000221205 1815 ntBASIC3.77□□□□□ -1.81
Ddb1Q3U1J4 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Ddb1Q3U1J4 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.76□□□□□ -1.81
Ddb1Q3U1J4 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ddb1Q3U1J4 Gm14768-201ENSMUST00000122126 678 ntBASIC3.76□□□□□ -1.81
Ddb1Q3U1J4 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.76□□□□□ -1.81
Ddb1Q3U1J4 Gm37715-201ENSMUST00000193206 235 ntBASIC3.76□□□□□ -1.81
Ddb1Q3U1J4 Gm43402-201ENSMUST00000197159 159 ntBASIC3.76□□□□□ -1.81
Ddb1Q3U1J4 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.76□□□□□ -1.81
Ddb1Q3U1J4 Gm44419-201ENSMUST00000203338 229 ntBASIC3.76□□□□□ -1.81
Ddb1Q3U1J4 Gm45403-201ENSMUST00000209453 276 ntBASIC3.76□□□□□ -1.81
Ddb1Q3U1J4 Gm23454-201ENSMUST00000083332 133 ntBASIC3.76□□□□□ -1.81
Ddb1Q3U1J4 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Ddb1Q3U1J4 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.75□□□□□ -1.81
Ddb1Q3U1J4 Gm15029-201ENSMUST00000119742 199 ntBASIC3.75□□□□□ -1.81
Ddb1Q3U1J4 Gm13396-201ENSMUST00000120617 271 ntBASIC3.75□□□□□ -1.81
Ddb1Q3U1J4 Gm25184-201ENSMUST00000157753 163 ntBASIC3.75□□□□□ -1.81
Ddb1Q3U1J4 Gm22766-201ENSMUST00000158372 99 ntBASIC3.75□□□□□ -1.81
Ddb1Q3U1J4 Gm25486-201ENSMUST00000158726 63 ntBASIC3.75□□□□□ -1.81
Ddb1Q3U1J4 Gm24086-201ENSMUST00000175171 98 ntBASIC3.75□□□□□ -1.81
Ddb1Q3U1J4 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ddb1Q3U1J4 Gm28900-201ENSMUST00000185232 156 ntBASIC3.75□□□□□ -1.81
Ddb1Q3U1J4 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC3.75□□□□□ -1.81
Ddb1Q3U1J4 Gm15088-201ENSMUST00000117973 1508 ntBASIC3.75□□□□□ -1.81
Ddb1Q3U1J4 Gm15098-201ENSMUST00000119036 1508 ntBASIC3.75□□□□□ -1.81
Ddb1Q3U1J4 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Ddb1Q3U1J4 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Gm24274-201ENSMUST00000116787 124 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Gm25316-201ENSMUST00000116826 118 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Gm26275-201ENSMUST00000157101 268 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Gm23120-201ENSMUST00000157654 287 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Gm22521-201ENSMUST00000158272 134 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Gm24618-201ENSMUST00000177718 94 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Gm23953-201ENSMUST00000178214 94 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Gm23141-201ENSMUST00000178682 94 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Gm26332-201ENSMUST00000179813 94 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Gm22863-201ENSMUST00000180265 94 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Gm28534-201ENSMUST00000187744 676 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Mir378a-201ENSMUST00000198300 66 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ddb1Q3U1J4 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 Gm25500-201ENSMUST00000104426 123 ntBASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 Gm13457-201ENSMUST00000117885 267 ntBASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 Gm24959-201ENSMUST00000157924 146 ntBASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 Gm24213-201ENSMUST00000158255 258 ntBASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 Mir5127-201ENSMUST00000175295 71 ntBASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 Gm20718-201ENSMUST00000176058 259 ntBASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 Gm45315-201ENSMUST00000209283 333 ntBASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 150.3 ms