Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm37431-201ENSMUST00000195102 111 ntBASIC4.56□□□□□ -1.68
Col9a1Q05722 Gm44358-201ENSMUST00000196301 98 ntBASIC4.56□□□□□ -1.68
Col9a1Q05722 CT009696.1-201ENSMUST00000215745 256 ntBASIC4.56□□□□□ -1.68
Col9a1Q05722 AC170999.2-201ENSMUST00000226223 264 ntBASIC4.56□□□□□ -1.68
Col9a1Q05722 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col9a1Q05722 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.56□□□□□ -1.68
Col9a1Q05722 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Col9a1Q05722 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.56□□□□□ -1.68
Col9a1Q05722 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col9a1Q05722 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col9a1Q05722 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col9a1Q05722 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Col9a1Q05722 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.55□□□□□ -1.68
Col9a1Q05722 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.55□□□□□ -1.68
Col9a1Q05722 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC4.55□□□□□ -1.68
Col9a1Q05722 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col9a1Q05722 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col9a1Q05722 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.55□□□□□ -1.68
Col9a1Q05722 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col9a1Q05722 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
Col9a1Q05722 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col9a1Q05722 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.55□□□□□ -1.68
Col9a1Q05722 Svet1-201ENSMUST00000209370 3940 ntBASIC4.55□□□□□ -1.68
Col9a1Q05722 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.55□□□□□ -1.68
Col9a1Q05722 Snord14c-201ENSMUST00000101927 86 ntBASIC4.55□□□□□ -1.68
Col9a1Q05722 Mir673-201ENSMUST00000102361 91 ntBASIC4.55□□□□□ -1.68
Col9a1Q05722 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.55□□□□□ -1.68
Col9a1Q05722 Gm22281-201ENSMUST00000157198 103 ntBASIC4.55□□□□□ -1.68
Col9a1Q05722 Gm23599-201ENSMUST00000157261 251 ntBASIC4.55□□□□□ -1.68
Col9a1Q05722 Gm22946-201ENSMUST00000158558 82 ntBASIC4.55□□□□□ -1.68
Col9a1Q05722 CT030687.1-201ENSMUST00000221854 162 ntBASIC4.55□□□□□ -1.68
Col9a1Q05722 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.55□□□□□ -1.68
Col9a1Q05722 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Col9a1Q05722 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Col9a1Q05722 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col9a1Q05722 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
Col9a1Q05722 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.55□□□□□ -1.68
Col9a1Q05722 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Col9a1Q05722 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col9a1Q05722 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col9a1Q05722 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col9a1Q05722 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col9a1Q05722 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col9a1Q05722 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
Col9a1Q05722 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col9a1Q05722 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Col9a1Q05722 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col9a1Q05722 Gm44177-201ENSMUST00000204338 2667 ntBASIC4.54□□□□□ -1.68
Col9a1Q05722 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col9a1Q05722 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col9a1Q05722 Gm15303-201ENSMUST00000118676 2624 ntBASIC4.54□□□□□ -1.68
Col9a1Q05722 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col9a1Q05722 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col9a1Q05722 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.54□□□□□ -1.68
Col9a1Q05722 Gm24281-201ENSMUST00000104234 136 ntBASIC4.54□□□□□ -1.68
Col9a1Q05722 Gm24477-201ENSMUST00000157438 103 ntBASIC4.54□□□□□ -1.68
Col9a1Q05722 Mir6371-201ENSMUST00000184470 111 ntBASIC4.54□□□□□ -1.68
Col9a1Q05722 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col9a1Q05722 Gm43155-201ENSMUST00000202661 494 ntBASIC4.54□□□□□ -1.68
Col9a1Q05722 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.54□□□□□ -1.68
Col9a1Q05722 Gm45080-201ENSMUST00000206648 283 ntBASIC4.54□□□□□ -1.68
Col9a1Q05722 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.54□□□□□ -1.68
Col9a1Q05722 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.54□□□□□ -1.68
Col9a1Q05722 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col9a1Q05722 AC160984.1-201ENSMUST00000225855 3154 ntBASIC4.54□□□□□ -1.68
Col9a1Q05722 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col9a1Q05722 Gm42635-201ENSMUST00000200266 2571 ntBASIC4.54□□□□□ -1.68
Col9a1Q05722 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col9a1Q05722 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.53□□□□□ -1.68
Col9a1Q05722 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC4.53□□□□□ -1.68
Col9a1Q05722 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col9a1Q05722 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col9a1Q05722 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col9a1Q05722 Gm24582-201ENSMUST00000103967 103 ntBASIC4.53□□□□□ -1.68
Col9a1Q05722 Gm24931-201ENSMUST00000158324 107 ntBASIC4.53□□□□□ -1.68
Col9a1Q05722 Mir3083-201ENSMUST00000175377 64 ntBASIC4.53□□□□□ -1.68
Col9a1Q05722 Gm42451-201ENSMUST00000197410 244 ntBASIC4.53□□□□□ -1.68
Col9a1Q05722 Gm45245-201ENSMUST00000210082 376 ntBASIC4.53□□□□□ -1.68
Col9a1Q05722 Gm22738-201ENSMUST00000083440 147 ntBASIC4.53□□□□□ -1.68
Col9a1Q05722 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col9a1Q05722 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.53□□□□□ -1.68
Col9a1Q05722 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.53□□□□□ -1.68
Col9a1Q05722 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col9a1Q05722 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col9a1Q05722 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col9a1Q05722 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col9a1Q05722 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col9a1Q05722 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col9a1Q05722 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col9a1Q05722 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.52□□□□□ -1.69
Col9a1Q05722 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col9a1Q05722 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Col9a1Q05722 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col9a1Q05722 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col9a1Q05722 Gm24718-201ENSMUST00000157521 136 ntBASIC4.52□□□□□ -1.69
Col9a1Q05722 Mir1936-201ENSMUST00000158699 93 ntBASIC4.52□□□□□ -1.69
Col9a1Q05722 Gm45791-201ENSMUST00000212908 352 ntBASIC4.52□□□□□ -1.69
Col9a1Q05722 Gm16976-205ENSMUST00000227324 226 ntBASIC4.52□□□□□ -1.69
Col9a1Q05722 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.52□□□□□ -1.69
Col9a1Q05722 Gm22443-201ENSMUST00000082890 107 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms