Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm25896-201ENSMUST00000083713 136 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Col8a1Q00780 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Col8a1Q00780 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col8a1Q00780 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.26□□□□□ -1.89
Col8a1Q00780 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
Col8a1Q00780 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col8a1Q00780 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col8a1Q00780 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm15148-201ENSMUST00000117602 156 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm13868-201ENSMUST00000122411 294 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm25985-201ENSMUST00000122677 107 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm22310-201ENSMUST00000157509 116 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm25220-201ENSMUST00000157546 95 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm26045-201ENSMUST00000157862 97 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm25494-201ENSMUST00000158143 100 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm16162-201ENSMUST00000162296 297 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm17186-201ENSMUST00000171742 456 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm25935-201ENSMUST00000178746 107 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm28344-201ENSMUST00000185704 279 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col8a1Q00780 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.26□□□□□ -1.89
Col8a1Q00780 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm24611-201ENSMUST00000083272 107 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Mir384-201ENSMUST00000083565 88 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm23042-201ENSMUST00000083866 101 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm23039-201ENSMUST00000083870 161 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm10161-201ENSMUST00000091506 204 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col8a1Q00780 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col8a1Q00780 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col8a1Q00780 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.26□□□□□ -1.89
Col8a1Q00780 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col8a1Q00780 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.26□□□□□ -1.89
Col8a1Q00780 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col8a1Q00780 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col8a1Q00780 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Col8a1Q00780 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Col8a1Q00780 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Col8a1Q00780 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col8a1Q00780 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col8a1Q00780 Gm23609-201ENSMUST00000104542 127 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 Gm12238-201ENSMUST00000127764 124 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 Gm24552-201ENSMUST00000158646 103 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 Gm23702-201ENSMUST00000158840 130 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 Gm7582-201ENSMUST00000160831 603 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 Gm28924-201ENSMUST00000190012 241 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 Gm43217-201ENSMUST00000199513 367 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 Gm43730-201ENSMUST00000199863 372 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.25□□□□□ -1.89
Col8a1Q00780 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col8a1Q00780 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col8a1Q00780 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.25□□□□□ -1.89
Col8a1Q00780 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col8a1Q00780 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Col8a1Q00780 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Col8a1Q00780 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col8a1Q00780 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col8a1Q00780 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col8a1Q00780 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col8a1Q00780 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col8a1Q00780 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col8a1Q00780 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col8a1Q00780 Mir466b-3-201ENSMUST00000103806 81 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Gm13343-201ENSMUST00000116474 105 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Gm11566-201ENSMUST00000118550 203 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Gm26171-201ENSMUST00000158422 131 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Gm2862-201ENSMUST00000161524 328 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Gm23415-201ENSMUST00000175519 83 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Gm28010-201ENSMUST00000179485 126 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Gm26097-201ENSMUST00000179642 93 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Gm44594-201ENSMUST00000208982 407 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Gm5358-201ENSMUST00000212814 353 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Gm7422-201ENSMUST00000220115 640 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col8a1Q00780 Gm26495-201ENSMUST00000083152 137 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Mir21a-201ENSMUST00000083521 92 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Gm25651-201ENSMUST00000083782 119 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Gm25257-201ENSMUST00000083907 110 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.24□□□□□ -1.89
Col8a1Q00780 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Col8a1Q00780 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col8a1Q00780 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms