Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.68□□□□□ -1.98
CiitaP79621 Mir127-201ENSMUST00000093568 70 ntBASIC2.68□□□□□ -1.98
CiitaP79621 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.68□□□□□ -1.98
CiitaP79621 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.68□□□□□ -1.98
CiitaP79621 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CiitaP79621 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Gm22486-201ENSMUST00000116815 137 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Gm13331-201ENSMUST00000117500 448 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Gm15211-201ENSMUST00000118932 528 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Gm12617-201ENSMUST00000121268 381 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Gm16218-201ENSMUST00000155424 388 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CiitaP79621 Gm19932-201ENSMUST00000177033 313 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Gm25314-201ENSMUST00000178810 79 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Gm3852-201ENSMUST00000182781 264 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Gm27588-201ENSMUST00000185096 263 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Gm29352-201ENSMUST00000188054 544 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Gm6796-201ENSMUST00000211919 243 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CiitaP79621 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CiitaP79621 Gm5374-201ENSMUST00000222868 657 ntBASIC2.67□□□□□ -1.98
CiitaP79621 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.67□□□□□ -1.98
CiitaP79621 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Gm6030-201ENSMUST00000078768 402 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Snord104-201ENSMUST00000083192 70 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Gm23040-201ENSMUST00000083869 163 ntBASIC2.67□□□□□ -1.98
CiitaP79621 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CiitaP79621 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CiitaP79621 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm26341-201ENSMUST00000104561 134 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm12255-201ENSMUST00000117184 284 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm12871-201ENSMUST00000118758 438 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24596-201ENSMUST00000122504 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm16355-201ENSMUST00000128606 231 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm23829-201ENSMUST00000157392 270 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24584-201ENSMUST00000157972 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm23016-201ENSMUST00000158431 62 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm7925-201ENSMUST00000166690 401 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm25211-201ENSMUST00000177553 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24540-201ENSMUST00000177627 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm25256-201ENSMUST00000177746 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22822-201ENSMUST00000177941 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Rnu6-201ENSMUST00000178023 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm23151-201ENSMUST00000178061 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm25245-201ENSMUST00000178139 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24753-201ENSMUST00000178183 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm25829-201ENSMUST00000178275 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22092-201ENSMUST00000178290 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24486-201ENSMUST00000178420 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm23217-201ENSMUST00000178482 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm26245-201ENSMUST00000178491 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm23610-201ENSMUST00000178659 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm23092-201ENSMUST00000178688 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm25709-201ENSMUST00000178844 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm25547-201ENSMUST00000178877 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm25312-201ENSMUST00000178972 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24722-201ENSMUST00000179017 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22969-201ENSMUST00000179018 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm25101-201ENSMUST00000179057 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm26378-201ENSMUST00000179093 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24873-201ENSMUST00000179101 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm23934-201ENSMUST00000179111 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22623-201ENSMUST00000179244 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm25737-201ENSMUST00000179274 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22618-201ENSMUST00000179376 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24182-201ENSMUST00000179419 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24242-201ENSMUST00000179440 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24863-201ENSMUST00000179499 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm25064-201ENSMUST00000179535 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm26295-201ENSMUST00000179690 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm23712-201ENSMUST00000179713 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22823-201ENSMUST00000179754 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22360-201ENSMUST00000179775 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24978-201ENSMUST00000179782 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24967-201ENSMUST00000179791 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm25173-201ENSMUST00000179794 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24870-201ENSMUST00000179897 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22288-201ENSMUST00000179904 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22645-201ENSMUST00000180010 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm24565-201ENSMUST00000180099 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm23805-201ENSMUST00000180129 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm23512-201ENSMUST00000180237 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm25327-201ENSMUST00000180263 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm26058-201ENSMUST00000180294 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22418-201ENSMUST00000180326 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm9402-201ENSMUST00000196849 388 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm44446-201ENSMUST00000204864 255 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.66□□□□□ -1.98
CiitaP79621 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.66□□□□□ -1.98
CiitaP79621 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.66□□□□□ -1.98
CiitaP79621 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CiitaP79621 Gm23629-201ENSMUST00000082465 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm23924-201ENSMUST00000082474 108 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22246-201ENSMUST00000082478 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22749-201ENSMUST00000082490 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22747-201ENSMUST00000082495 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm22063-201ENSMUST00000082560 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm23057-201ENSMUST00000082801 107 ntBASIC2.66□□□□□ -1.98
CiitaP79621 Gm26328-201ENSMUST00000082821 107 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms