Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm12080-201ENSMUST00000119821 1883 ntBASIC4.3□□□□□ -1.72
Rfx1P48377 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rfx1P48377 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rfx1P48377 Gm13504-201ENSMUST00000117490 316 ntBASIC4.3□□□□□ -1.72
Rfx1P48377 Gm22537-201ENSMUST00000158172 199 ntBASIC4.3□□□□□ -1.72
Rfx1P48377 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Rfx1P48377 Gm20399-201ENSMUST00000174652 132 ntBASIC4.3□□□□□ -1.72
Rfx1P48377 Gm25999-201ENSMUST00000175398 133 ntBASIC4.3□□□□□ -1.72
Rfx1P48377 Gm20058-201ENSMUST00000186939 284 ntBASIC4.3□□□□□ -1.72
Rfx1P48377 Gm37001-201ENSMUST00000193377 190 ntBASIC4.3□□□□□ -1.72
Rfx1P48377 Gm37479-201ENSMUST00000194169 3841 ntBASIC4.3□□□□□ -1.72
Rfx1P48377 Gm37575-201ENSMUST00000195467 309 ntBASIC4.3□□□□□ -1.72
Rfx1P48377 Gm44322-201ENSMUST00000196830 115 ntBASIC4.3□□□□□ -1.72
Rfx1P48377 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.3□□□□□ -1.72
Rfx1P48377 Gm23462-201ENSMUST00000083264 104 ntBASIC4.3□□□□□ -1.72
Rfx1P48377 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4.3□□□□□ -1.72
Rfx1P48377 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.3□□□□□ -1.72
Rfx1P48377 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
Rfx1P48377 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Rfx1P48377 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
Rfx1P48377 Gm42446-201ENSMUST00000199783 3284 ntBASIC4.29□□□□□ -1.72
Rfx1P48377 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.29□□□□□ -1.72
Rfx1P48377 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Rfx1P48377 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Rfx1P48377 Gm24582-201ENSMUST00000103967 103 ntBASIC4.29□□□□□ -1.72
Rfx1P48377 Gm12797-201ENSMUST00000118645 273 ntBASIC4.29□□□□□ -1.72
Rfx1P48377 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.29□□□□□ -1.72
Rfx1P48377 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.29□□□□□ -1.72
Rfx1P48377 Gm22842-201ENSMUST00000157709 118 ntBASIC4.29□□□□□ -1.72
Rfx1P48377 Gm24961-201ENSMUST00000157918 184 ntBASIC4.29□□□□□ -1.72
Rfx1P48377 Gm24601-201ENSMUST00000157970 143 ntBASIC4.29□□□□□ -1.72
Rfx1P48377 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.29□□□□□ -1.72
Rfx1P48377 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.29□□□□□ -1.72
Rfx1P48377 Gm38356-201ENSMUST00000194313 408 ntBASIC4.29□□□□□ -1.72
Rfx1P48377 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.29□□□□□ -1.72
Rfx1P48377 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Rfx1P48377 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rfx1P48377 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Rfx1P48377 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 Gm43230-201ENSMUST00000200980 2129 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rfx1P48377 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rfx1P48377 Mir551b-201ENSMUST00000102165 98 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 Gm6897-201ENSMUST00000117714 138 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 Gm14758-201ENSMUST00000119104 138 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 Gm22482-201ENSMUST00000122563 359 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC4.28□□□□□ -1.72
Rfx1P48377 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC4.28□□□□□ -1.72
Rfx1P48377 Gm25390-201ENSMUST00000157341 103 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 Gm25863-201ENSMUST00000158249 329 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 Gm24878-201ENSMUST00000158782 104 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rfx1P48377 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Rfx1P48377 Gm27220-201ENSMUST00000183453 262 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC4.28□□□□□ -1.72
Rfx1P48377 AC161758.2-201ENSMUST00000228513 218 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 Gm10092-201ENSMUST00000077110 180 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 Gm23461-201ENSMUST00000083265 107 ntBASIC4.28□□□□□ -1.72
Rfx1P48377 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Rfx1P48377 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Rfx1P48377 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Rfx1P48377 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.27□□□□□ -1.73
Rfx1P48377 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Rfx1P48377 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Rfx1P48377 Mir1b-201ENSMUST00000117012 122 ntBASIC4.27□□□□□ -1.73
Rfx1P48377 Gm15268-201ENSMUST00000118845 352 ntBASIC4.27□□□□□ -1.73
Rfx1P48377 Gm24594-201ENSMUST00000122502 99 ntBASIC4.27□□□□□ -1.73
Rfx1P48377 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rfx1P48377 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rfx1P48377 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.27□□□□□ -1.73
Rfx1P48377 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Rfx1P48377 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Rfx1P48377 Gm23013-201ENSMUST00000104146 106 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm22215-201ENSMUST00000157558 96 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm22336-201ENSMUST00000157719 107 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm28020-201ENSMUST00000157739 67 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm25438-201ENSMUST00000158281 110 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm24503-201ENSMUST00000158454 135 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm25654-201ENSMUST00000158467 88 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm22531-201ENSMUST00000158819 140 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm23476-201ENSMUST00000158881 274 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.26□□□□□ -1.73
Rfx1P48377 Gm24811-201ENSMUST00000175313 100 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Mir6345-201ENSMUST00000184286 128 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx1P48377 Gm29022-201ENSMUST00000190702 225 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm28267-201ENSMUST00000191093 265 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm37290-201ENSMUST00000195775 339 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm45687-201ENSMUST00000209454 155 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx1P48377 AC159896.1-201ENSMUST00000215264 215 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Snord47-201ENSMUST00000083034 77 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.26□□□□□ -1.73
Rfx1P48377 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Rfx1P48377 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rfx1P48377 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Rfx1P48377 Gm23481-201ENSMUST00000104173 131 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 427.5 ms