Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC0.18□□□□□ -2.38
HttP42859 Mir107-201ENSMUST00000083660 87 ntBASIC0.18□□□□□ -2.38
HttP42859 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC0.17□□□□□ -2.38
HttP42859 Gm17085-201ENSMUST00000165425 502 ntBASIC0.17□□□□□ -2.38
HttP42859 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.17□□□□□ -2.38
HttP42859 AC134254.4-201ENSMUST00000223086 370 ntBASIC0.17□□□□□ -2.38
HttP42859 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
HttP42859 Gm26128-201ENSMUST00000083170 110 ntBASIC0.17□□□□□ -2.38
HttP42859 Mir93-201ENSMUST00000083593 88 ntBASIC0.17□□□□□ -2.38
HttP42859 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.17□□□□□ -2.38
HttP42859 Gm42672-201ENSMUST00000197821 352 ntBASIC0.17□□□□□ -2.38
HttP42859 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.17□□□□□ -2.38
HttP42859 AC161758.2-201ENSMUST00000228513 218 ntBASIC0.17□□□□□ -2.38
HttP42859 Gm12636-201ENSMUST00000117395 624 ntBASIC0.16□□□□□ -2.38
HttP42859 Gm8217-201ENSMUST00000119136 465 ntBASIC0.16□□□□□ -2.38
HttP42859 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.16□□□□□ -2.38
HttP42859 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
HttP42859 Gm24915-201ENSMUST00000157288 78 ntBASIC0.16□□□□□ -2.38
HttP42859 Gm22663-201ENSMUST00000158721 102 ntBASIC0.16□□□□□ -2.38
HttP42859 Gm16162-201ENSMUST00000162296 297 ntBASIC0.16□□□□□ -2.38
HttP42859 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.16□□□□□ -2.38
HttP42859 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.16□□□□□ -2.38
HttP42859 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.16□□□□□ -2.38
HttP42859 Gm3025-201ENSMUST00000163454 489 ntBASIC0.16□□□□□ -2.38
HttP42859 Gm3111-201ENSMUST00000167426 490 ntBASIC0.16□□□□□ -2.38
HttP42859 Gm25035-201ENSMUST00000175414 77 ntBASIC0.16□□□□□ -2.38
HttP42859 Gm27884-201ENSMUST00000183865 76 ntBASIC0.16□□□□□ -2.38
HttP42859 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC0.16□□□□□ -2.38
HttP42859 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
HttP42859 Gm44794-201ENSMUST00000206550 411 ntBASIC0.16□□□□□ -2.38
HttP42859 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.16□□□□□ -2.38
HttP42859 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.16□□□□□ -2.38
HttP42859 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.16□□□□□ -2.38
HttP42859 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
HttP42859 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.16□□□□□ -2.38
HttP42859 Gm13672-201ENSMUST00000117554 459 ntBASIC0.15□□□□□ -2.39
HttP42859 Gm22087-201ENSMUST00000158339 88 ntBASIC0.15□□□□□ -2.39
HttP42859 Gm17154-201ENSMUST00000165748 431 ntBASIC0.15□□□□□ -2.39
HttP42859 Gm10925-201ENSMUST00000189941 678 ntBASIC0.15□□□□□ -2.39
HttP42859 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.15□□□□□ -2.39
HttP42859 Gm25141-201ENSMUST00000083177 107 ntBASIC0.15□□□□□ -2.39
HttP42859 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC0.15□□□□□ -2.39
HttP42859 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.15□□□□□ -2.39
HttP42859 Gm16399-201ENSMUST00000181423 219 ntBASIC0.15□□□□□ -2.39
HttP42859 Mir7675-201ENSMUST00000184262 58 ntBASIC0.15□□□□□ -2.39
HttP42859 Gm38208-201ENSMUST00000192476 114 ntBASIC0.15□□□□□ -2.39
HttP42859 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
HttP42859 Gm25589-201ENSMUST00000082502 166 ntBASIC0.15□□□□□ -2.39
HttP42859 Gm20811-201ENSMUST00000190500 553 ntBASIC0.14□□□□□ -2.39
HttP42859 Gm45366-201ENSMUST00000209828 384 ntBASIC0.14□□□□□ -2.39
HttP42859 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.14□□□□□ -2.39
HttP42859 Gm45374-201ENSMUST00000211388 136 ntBASIC0.14□□□□□ -2.39
HttP42859 Gm23299-201ENSMUST00000082708 79 ntBASIC0.14□□□□□ -2.39
HttP42859 Gm25853-201ENSMUST00000082793 132 ntBASIC0.14□□□□□ -2.39
HttP42859 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
HttP42859 Mir290a-201ENSMUST00000104627 83 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm24587-201ENSMUST00000116697 89 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm24747-201ENSMUST00000157835 87 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm26213-201ENSMUST00000158582 110 ntBASIC0.13□□□□□ -2.39
HttP42859 Mir6399-201ENSMUST00000184050 84 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm44088-201ENSMUST00000204595 237 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm24456-201ENSMUST00000083198 107 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
HttP42859 Gm29397-201ENSMUST00000185205 333 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm44137-201ENSMUST00000203670 367 ntBASIC0.13□□□□□ -2.39
HttP42859 Snora41-201ENSMUST00000082668 132 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm4732-201ENSMUST00000118778 473 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm12872-201ENSMUST00000121835 320 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm23761-201ENSMUST00000158347 104 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
HttP42859 Gm18775-201ENSMUST00000190763 586 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm42796-201ENSMUST00000199913 1087 ntBASIC0.13□□□□□ -2.39
HttP42859 AC159293.2-201ENSMUST00000222289 424 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm26224-201ENSMUST00000082506 80 ntBASIC0.13□□□□□ -2.39
HttP42859 Gm24049-201ENSMUST00000102409 100 ntBASIC0.12□□□□□ -2.39
HttP42859 Gm25624-201ENSMUST00000157222 275 ntBASIC0.12□□□□□ -2.39
HttP42859 Gm23332-201ENSMUST00000157424 275 ntBASIC0.12□□□□□ -2.39
HttP42859 Gm22429-201ENSMUST00000158553 130 ntBASIC0.12□□□□□ -2.39
HttP42859 Gm18956-201ENSMUST00000192857 480 ntBASIC0.12□□□□□ -2.39
HttP42859 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.12□□□□□ -2.39
HttP42859 Gm25788-201ENSMUST00000082721 131 ntBASIC0.12□□□□□ -2.39
HttP42859 Snord95-201ENSMUST00000082846 68 ntBASIC0.12□□□□□ -2.39
HttP42859 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
HttP42859 AC165284.1-201ENSMUST00000228614 458 ntBASIC0.12□□□□□ -2.39
HttP42859 Gm25703-201ENSMUST00000083123 151 ntBASIC0.12□□□□□ -2.39
HttP42859 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
HttP42859 Gm18354-201ENSMUST00000173515 1068 ntBASIC0.11□□□□□ -2.39
HttP42859 Gm18588-201ENSMUST00000177308 492 ntBASIC0.11□□□□□ -2.39
HttP42859 Gm5309-201ENSMUST00000197416 677 ntBASIC0.11□□□□□ -2.39
HttP42859 Gm45288-201ENSMUST00000210236 151 ntBASIC0.11□□□□□ -2.39
HttP42859 Gm21937-201ENSMUST00000222825 218 ntBASIC0.11□□□□□ -2.39
HttP42859 AC147545.1-201ENSMUST00000227528 108 ntBASIC0.11□□□□□ -2.39
HttP42859 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC0.11□□□□□ -2.39
HttP42859 Gm23836-201ENSMUST00000104434 129 ntBASIC0.11□□□□□ -2.39
HttP42859 Gm11843-201ENSMUST00000118984 425 ntBASIC0.11□□□□□ -2.39
HttP42859 Gm14362-201ENSMUST00000121679 273 ntBASIC0.11□□□□□ -2.39
HttP42859 Gm6956-201ENSMUST00000134724 546 ntBASIC0.11□□□□□ -2.39
HttP42859 Gm15254-201ENSMUST00000149567 273 ntBASIC0.11□□□□□ -2.39
HttP42859 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
HttP42859 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms