Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm24393-201ENSMUST00000158135 97 ntBASIC2.65□□□□□ -1.99
Traf1P39428 Gm15900-201ENSMUST00000161584 342 ntBASIC2.65□□□□□ -1.99
Traf1P39428 Gm24862-201ENSMUST00000179103 79 ntBASIC2.65□□□□□ -1.99
Traf1P39428 Gm23310-201ENSMUST00000179105 79 ntBASIC2.65□□□□□ -1.99
Traf1P39428 Gm25461-201ENSMUST00000179293 79 ntBASIC2.65□□□□□ -1.99
Traf1P39428 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.65□□□□□ -1.99
Traf1P39428 Gm18775-201ENSMUST00000190763 586 ntBASIC2.65□□□□□ -1.99
Traf1P39428 Gm37557-201ENSMUST00000191640 139 ntBASIC2.65□□□□□ -1.99
Traf1P39428 Mir7217-201ENSMUST00000200304 62 ntBASIC2.65□□□□□ -1.99
Traf1P39428 Gm44024-201ENSMUST00000203008 476 ntBASIC2.65□□□□□ -1.99
Traf1P39428 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.65□□□□□ -1.99
Traf1P39428 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.65□□□□□ -1.99
Traf1P39428 Gm9377-201ENSMUST00000207227 623 ntBASIC2.65□□□□□ -1.99
Traf1P39428 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.65□□□□□ -1.99
Traf1P39428 Gm25130-201ENSMUST00000082650 156 ntBASIC2.65□□□□□ -1.99
Traf1P39428 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Traf1P39428 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Traf1P39428 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.64□□□□□ -1.99
Traf1P39428 Gm13378-201ENSMUST00000117483 336 ntBASIC2.64□□□□□ -1.99
Traf1P39428 Gm12871-201ENSMUST00000118758 438 ntBASIC2.64□□□□□ -1.99
Traf1P39428 Gm15536-201ENSMUST00000121411 114 ntBASIC2.64□□□□□ -1.99
Traf1P39428 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.64□□□□□ -1.99
Traf1P39428 Gm25339-201ENSMUST00000157458 232 ntBASIC2.64□□□□□ -1.99
Traf1P39428 Mir1927-201ENSMUST00000158579 109 ntBASIC2.64□□□□□ -1.99
Traf1P39428 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.64□□□□□ -1.99
Traf1P39428 Gm6059-201ENSMUST00000196903 340 ntBASIC2.64□□□□□ -1.99
Traf1P39428 Mir3069-201ENSMUST00000198802 65 ntBASIC2.64□□□□□ -1.99
Traf1P39428 AL935138.1-201ENSMUST00000215309 196 ntBASIC2.64□□□□□ -1.99
Traf1P39428 AC123062.1-201ENSMUST00000221287 481 ntBASIC2.64□□□□□ -1.99
Traf1P39428 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Traf1P39428 Gm25402-201ENSMUST00000082966 131 ntBASIC2.64□□□□□ -1.99
Traf1P39428 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
Traf1P39428 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.64□□□□□ -1.99
Traf1P39428 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.64□□□□□ -1.99
Traf1P39428 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Traf1P39428 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Traf1P39428 Gm23202-201ENSMUST00000104376 129 ntBASIC2.63□□□□□ -1.99
Traf1P39428 Gm14823-201ENSMUST00000117698 238 ntBASIC2.63□□□□□ -1.99
Traf1P39428 Gm24937-201ENSMUST00000122597 134 ntBASIC2.63□□□□□ -1.99
Traf1P39428 Gm25961-201ENSMUST00000157174 135 ntBASIC2.63□□□□□ -1.99
Traf1P39428 Gm23829-201ENSMUST00000157392 270 ntBASIC2.63□□□□□ -1.99
Traf1P39428 Gm16584-201ENSMUST00000159267 189 ntBASIC2.63□□□□□ -1.99
Traf1P39428 Gm44910-201ENSMUST00000208451 396 ntBASIC2.63□□□□□ -1.99
Traf1P39428 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.63□□□□□ -1.99
Traf1P39428 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.63□□□□□ -1.99
Traf1P39428 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.63□□□□□ -1.99
Traf1P39428 Gm14774-201ENSMUST00000117857 536 ntBASIC2.62□□□□□ -1.99
Traf1P39428 Gm8858-201ENSMUST00000118259 342 ntBASIC2.62□□□□□ -1.99
Traf1P39428 Gm12956-201ENSMUST00000122184 414 ntBASIC2.62□□□□□ -1.99
Traf1P39428 Gm29231-201ENSMUST00000179850 319 ntBASIC2.62□□□□□ -1.99
Traf1P39428 Mir3068-202ENSMUST00000197755 79 ntBASIC2.62□□□□□ -1.99
Traf1P39428 Gm43510-201ENSMUST00000197922 353 ntBASIC2.62□□□□□ -1.99
Traf1P39428 Gm43083-201ENSMUST00000199594 476 ntBASIC2.62□□□□□ -1.99
Traf1P39428 Mir691-201ENSMUST00000199719 78 ntBASIC2.62□□□□□ -1.99
Traf1P39428 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Traf1P39428 AC167192.1-201ENSMUST00000225908 139 ntBASIC2.62□□□□□ -1.99
Traf1P39428 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Traf1P39428 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Traf1P39428 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.62□□□□□ -1.99
Traf1P39428 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Traf1P39428 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.62□□□□□ -1.99
Traf1P39428 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Traf1P39428 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Traf1P39428 Gm23472-201ENSMUST00000101806 191 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Gm24049-201ENSMUST00000102409 100 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Mir344e-201ENSMUST00000104677 66 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Traf1P39428 Gm14652-201ENSMUST00000118479 235 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Gm11835-201ENSMUST00000120635 663 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.61□□□□□ -1.99
Traf1P39428 Gm26102-201ENSMUST00000157251 284 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Gm23642-201ENSMUST00000157858 258 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Gm22947-201ENSMUST00000158559 91 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Gm24497-201ENSMUST00000177868 191 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Gm25939-201ENSMUST00000179876 191 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Gm27385-201ENSMUST00000184747 104 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Traf1P39428 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Traf1P39428 Gm43978-201ENSMUST00000203491 451 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.61□□□□□ -1.99
Traf1P39428 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Gm25796-201ENSMUST00000082645 163 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Gm25475-201ENSMUST00000082825 180 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Gm23444-201ENSMUST00000082922 191 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Gm22866-201ENSMUST00000083947 177 ntBASIC2.61□□□□□ -1.99
Traf1P39428 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.61□□□□□ -1.99
Traf1P39428 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Traf1P39428 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Traf1P39428 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Traf1P39428 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Traf1P39428 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Traf1P39428 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.6□□□□□ -1.99
Traf1P39428 Gm23000-201ENSMUST00000157083 139 ntBASIC2.6□□□□□ -1.99
Traf1P39428 Gm23332-201ENSMUST00000157424 275 ntBASIC2.6□□□□□ -1.99
Traf1P39428 Gm25454-201ENSMUST00000157947 315 ntBASIC2.6□□□□□ -1.99
Traf1P39428 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.6□□□□□ -1.99
Traf1P39428 Gm29350-201ENSMUST00000189141 541 ntBASIC2.6□□□□□ -1.99
Traf1P39428 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 123.2 ms