| Hoxa11 | P31311 | AC154527.5-201 | ENSMUST00000224448 | 496 nt | BASIC | 3.14 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | AC158395.1-201 | ENSMUST00000227206 | 452 nt | BASIC | 3.14 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm9772-201 | ENSMUST00000075018 | 408 nt | APPRIS P1 TSL 5 BASIC | 3.14 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Olfr1135-202 | ENSMUST00000213835 | 2648 nt | APPRIS P1 TSL 5 BASIC | 3.14 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Olfr1126-202 | ENSMUST00000213366 | 1827 nt | APPRIS P1 TSL 3 BASIC | 3.14 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Olfr681-205 | ENSMUST00000216247 | 4729 nt | APPRIS P1 TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Prlr-202 | ENSMUST00000124470 | 9900 nt | APPRIS P3 TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm12793-201 | ENSMUST00000119268 | 292 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm13396-201 | ENSMUST00000120617 | 271 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm11816-201 | ENSMUST00000142744 | 353 nt | TSL 3 BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm23047-201 | ENSMUST00000177661 | 94 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm29512-201 | ENSMUST00000185544 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28110-201 | ENSMUST00000185782 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28838-201 | ENSMUST00000186338 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm29057-201 | ENSMUST00000186468 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm29661-201 | ENSMUST00000186781 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28737-201 | ENSMUST00000186808 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm29118-201 | ENSMUST00000186908 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm29429-201 | ENSMUST00000187071 | 121 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28433-201 | ENSMUST00000187085 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm29635-201 | ENSMUST00000187221 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | 1700029M03Rik-201 | ENSMUST00000187300 | 444 nt | TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28759-201 | ENSMUST00000187621 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28831-201 | ENSMUST00000187739 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28200-201 | ENSMUST00000187778 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm29026-201 | ENSMUST00000187787 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28752-201 | ENSMUST00000188340 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28797-201 | ENSMUST00000188543 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28855-201 | ENSMUST00000188680 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm29378-201 | ENSMUST00000188723 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28569-201 | ENSMUST00000188748 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28120-201 | ENSMUST00000188812 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28369-201 | ENSMUST00000188993 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm29037-201 | ENSMUST00000189092 | 313 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28909-201 | ENSMUST00000189406 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28705-201 | ENSMUST00000189548 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28861-201 | ENSMUST00000189681 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm29180-201 | ENSMUST00000190003 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28939-201 | ENSMUST00000190351 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm28223-201 | ENSMUST00000190469 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm29575-201 | ENSMUST00000190597 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm29092-201 | ENSMUST00000190768 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm29469-201 | ENSMUST00000191448 | 315 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm37338-201 | ENSMUST00000191986 | 127 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm38361-201 | ENSMUST00000193419 | 458 nt | TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm34073-201 | ENSMUST00000195736 | 212 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Mir9-1-201 | ENSMUST00000199907 | 89 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | AC157352.1-201 | ENSMUST00000222762 | 303 nt | TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | AC165092.3-201 | ENSMUST00000223602 | 282 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | mt-Co3-201 | ENSMUST00000082409 | 784 nt | APPRIS P1 BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm45159-201 | ENSMUST00000208630 | 25241 nt | TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Olfr776-202 | ENSMUST00000213512 | 3499 nt | APPRIS P1 TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm15302-201 | ENSMUST00000117779 | 2630 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | AC122850.1-201 | ENSMUST00000220380 | 5690 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm12128-201 | ENSMUST00000131013 | 2914 nt | TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Vmn2r-ps83-201 | ENSMUST00000173787 | 2368 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Rag2-201 | ENSMUST00000044031 | 3424 nt | APPRIS P1 TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm37236-201 | ENSMUST00000193670 | 3249 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm13479-201 | ENSMUST00000130773 | 4722 nt | TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm13343-201 | ENSMUST00000116474 | 105 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Mir466k-201 | ENSMUST00000116774 | 122 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm15936-201 | ENSMUST00000118706 | 460 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm15029-201 | ENSMUST00000119742 | 199 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm11388-201 | ENSMUST00000120908 | 159 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm13903-201 | ENSMUST00000120945 | 193 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm24596-201 | ENSMUST00000122504 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm13656-201 | ENSMUST00000123829 | 345 nt | TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm23137-201 | ENSMUST00000157559 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm24584-201 | ENSMUST00000157972 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm24681-201 | ENSMUST00000158760 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm25211-201 | ENSMUST00000177553 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm24540-201 | ENSMUST00000177627 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm25256-201 | ENSMUST00000177746 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm22822-201 | ENSMUST00000177941 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Rnu6-201 | ENSMUST00000178023 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm23151-201 | ENSMUST00000178061 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm25245-201 | ENSMUST00000178139 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm24753-201 | ENSMUST00000178183 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm25829-201 | ENSMUST00000178275 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm22092-201 | ENSMUST00000178290 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm24486-201 | ENSMUST00000178420 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm23217-201 | ENSMUST00000178482 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm26245-201 | ENSMUST00000178491 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm23610-201 | ENSMUST00000178659 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm23092-201 | ENSMUST00000178688 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm25709-201 | ENSMUST00000178844 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm25547-201 | ENSMUST00000178877 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm25312-201 | ENSMUST00000178972 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm24722-201 | ENSMUST00000179017 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm22969-201 | ENSMUST00000179018 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm25101-201 | ENSMUST00000179057 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm26378-201 | ENSMUST00000179093 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm24873-201 | ENSMUST00000179101 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm23934-201 | ENSMUST00000179111 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm22623-201 | ENSMUST00000179244 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm25737-201 | ENSMUST00000179274 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm22618-201 | ENSMUST00000179376 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm24182-201 | ENSMUST00000179419 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm24242-201 | ENSMUST00000179440 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa11 | P31311 | Gm24863-201 | ENSMUST00000179499 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |