Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RaraP11416 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RaraP11416 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RaraP11416 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RaraP11416 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RaraP11416 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
RaraP11416 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.08□□□□□ -1.76
RaraP11416 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RaraP11416 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RaraP11416 Gm14282-201ENSMUST00000119484 240 ntBASIC4.08□□□□□ -1.76
RaraP11416 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.08□□□□□ -1.76
RaraP11416 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RaraP11416 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC4.08□□□□□ -1.76
RaraP11416 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RaraP11416 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.08□□□□□ -1.76
RaraP11416 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RaraP11416 Gm45162-201ENSMUST00000209013 618 ntBASIC4.08□□□□□ -1.76
RaraP11416 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC4.08□□□□□ -1.76
RaraP11416 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.08□□□□□ -1.76
RaraP11416 Gm25581-201ENSMUST00000083410 164 ntBASIC4.08□□□□□ -1.76
RaraP11416 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RaraP11416 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RaraP11416 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RaraP11416 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.07□□□□□ -1.76
RaraP11416 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC4.07□□□□□ -1.76
RaraP11416 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.07□□□□□ -1.76
RaraP11416 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RaraP11416 Gm14069-201ENSMUST00000120815 229 ntBASIC4.07□□□□□ -1.76
RaraP11416 Gm25269-201ENSMUST00000122601 104 ntBASIC4.07□□□□□ -1.76
RaraP11416 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.07□□□□□ -1.76
RaraP11416 Gm26148-201ENSMUST00000157430 68 ntBASIC4.07□□□□□ -1.76
RaraP11416 Gm22316-201ENSMUST00000158012 216 ntBASIC4.07□□□□□ -1.76
RaraP11416 Gm24850-201ENSMUST00000158029 119 ntBASIC4.07□□□□□ -1.76
RaraP11416 Gm25369-201ENSMUST00000158848 132 ntBASIC4.07□□□□□ -1.76
RaraP11416 Gm6660-201ENSMUST00000179149 468 ntBASIC4.07□□□□□ -1.76
RaraP11416 Gm10067-201ENSMUST00000179462 348 ntBASIC4.07□□□□□ -1.76
RaraP11416 Gm23370-202ENSMUST00000197008 129 ntBASIC4.07□□□□□ -1.76
RaraP11416 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.07□□□□□ -1.76
RaraP11416 AC173345.2-201ENSMUST00000222795 153 ntBASIC4.07□□□□□ -1.76
RaraP11416 AC183092.1-201ENSMUST00000224301 153 ntBASIC4.07□□□□□ -1.76
RaraP11416 Gm25814-201ENSMUST00000082754 107 ntBASIC4.07□□□□□ -1.76
RaraP11416 Gm23462-201ENSMUST00000083264 104 ntBASIC4.07□□□□□ -1.76
RaraP11416 Gm24164-201ENSMUST00000093663 104 ntBASIC4.07□□□□□ -1.76
RaraP11416 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RaraP11416 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RaraP11416 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.07□□□□□ -1.76
RaraP11416 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
RaraP11416 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RaraP11416 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RaraP11416 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RaraP11416 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RaraP11416 Gm24745-201ENSMUST00000157840 85 ntBASIC4.06□□□□□ -1.76
RaraP11416 Mir6414-201ENSMUST00000183685 82 ntBASIC4.06□□□□□ -1.76
RaraP11416 Mir3620-201ENSMUST00000184710 61 ntBASIC4.06□□□□□ -1.76
RaraP11416 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.06□□□□□ -1.76
RaraP11416 Gm42526-201ENSMUST00000198956 393 ntBASIC4.06□□□□□ -1.76
RaraP11416 Gm18015-201ENSMUST00000214879 316 ntBASIC4.06□□□□□ -1.76
RaraP11416 Gm23138-201ENSMUST00000083365 103 ntBASIC4.06□□□□□ -1.76
RaraP11416 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
RaraP11416 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RaraP11416 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.06□□□□□ -1.76
RaraP11416 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.06□□□□□ -1.76
RaraP11416 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RaraP11416 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RaraP11416 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RaraP11416 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RaraP11416 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.06□□□□□ -1.76
RaraP11416 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
RaraP11416 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RaraP11416 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RaraP11416 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RaraP11416 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RaraP11416 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RaraP11416 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RaraP11416 Gm21940-201ENSMUST00000204940 2278 ntBASIC4.05□□□□□ -1.76
RaraP11416 Mir551b-201ENSMUST00000102165 98 ntBASIC4.05□□□□□ -1.76
RaraP11416 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RaraP11416 Gm23481-201ENSMUST00000104173 131 ntBASIC4.05□□□□□ -1.76
RaraP11416 Gm23536-201ENSMUST00000157541 134 ntBASIC4.05□□□□□ -1.76
RaraP11416 Gm25424-201ENSMUST00000157612 58 ntBASIC4.05□□□□□ -1.76
RaraP11416 Gm25436-201ENSMUST00000158275 145 ntBASIC4.05□□□□□ -1.76
RaraP11416 Mir1251-201ENSMUST00000175486 84 ntBASIC4.05□□□□□ -1.76
RaraP11416 Gm26097-201ENSMUST00000179642 93 ntBASIC4.05□□□□□ -1.76
RaraP11416 Gm37693-201ENSMUST00000194562 234 ntBASIC4.05□□□□□ -1.76
RaraP11416 Igkv1-136-201ENSMUST00000200635 297 ntBASIC4.05□□□□□ -1.76
RaraP11416 Gm45539-201ENSMUST00000210313 428 ntBASIC4.05□□□□□ -1.76
RaraP11416 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.05□□□□□ -1.76
RaraP11416 Gm25815-201ENSMUST00000082755 107 ntBASIC4.05□□□□□ -1.76
RaraP11416 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RaraP11416 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RaraP11416 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RaraP11416 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.05□□□□□ -1.76
RaraP11416 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RaraP11416 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RaraP11416 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.04□□□□□ -1.76
RaraP11416 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.04□□□□□ -1.76
RaraP11416 Gm23013-201ENSMUST00000104146 106 ntBASIC4.04□□□□□ -1.76
RaraP11416 Gm15936-201ENSMUST00000118706 460 ntBASIC4.04□□□□□ -1.76
RaraP11416 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.04□□□□□ -1.76
RaraP11416 Gm23257-201ENSMUST00000158322 132 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 116.6 ms