Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm14833-201ENSMUST00000118345 1027 ntBASIC2.2□□□□□ -2.06
Lire1P11260 Gm23600-201ENSMUST00000157260 71 ntBASIC2.2□□□□□ -2.06
Lire1P11260 Gm24518-201ENSMUST00000180275 94 ntBASIC2.2□□□□□ -2.06
Lire1P11260 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Lire1P11260 Mir6355-201ENSMUST00000183687 106 ntBASIC2.2□□□□□ -2.06
Lire1P11260 Gm27979-201ENSMUST00000185126 56 ntBASIC2.2□□□□□ -2.06
Lire1P11260 Gm27369-201ENSMUST00000185182 71 ntBASIC2.2□□□□□ -2.06
Lire1P11260 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.2□□□□□ -2.06
Lire1P11260 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.2□□□□□ -2.06
Lire1P11260 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.2□□□□□ -2.06
Lire1P11260 Gm25813-201ENSMUST00000082748 191 ntBASIC2.2□□□□□ -2.06
Lire1P11260 Gm25698-201ENSMUST00000082897 107 ntBASIC2.2□□□□□ -2.06
Lire1P11260 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Lire1P11260 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.2□□□□□ -2.06
Lire1P11260 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Lire1P11260 Gm26015-201ENSMUST00000104402 125 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Gm23551-201ENSMUST00000116852 121 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Gm14624-201ENSMUST00000117746 192 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Gm24937-201ENSMUST00000122597 134 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Gm24481-201ENSMUST00000157210 102 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Gm25866-201ENSMUST00000158245 112 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Gm24573-201ENSMUST00000175499 112 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Mir3961-201ENSMUST00000198795 59 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Gm26379-202ENSMUST00000200225 132 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.19□□□□□ -2.06
Lire1P11260 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Lire1P11260 Gm26228-201ENSMUST00000082512 107 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Gm25080-201ENSMUST00000082526 107 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Gm25518-201ENSMUST00000083864 107 ntBASIC2.19□□□□□ -2.06
Lire1P11260 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.19□□□□□ -2.06
Lire1P11260 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Lire1P11260 Gm24598-201ENSMUST00000122510 74 ntBASIC2.18□□□□□ -2.06
Lire1P11260 Gm23331-201ENSMUST00000157423 108 ntBASIC2.18□□□□□ -2.06
Lire1P11260 Gm22517-201ENSMUST00000158265 136 ntBASIC2.18□□□□□ -2.06
Lire1P11260 Gm24771-201ENSMUST00000158508 137 ntBASIC2.18□□□□□ -2.06
Lire1P11260 Gm23181-201ENSMUST00000158685 110 ntBASIC2.18□□□□□ -2.06
Lire1P11260 Gm23005-201ENSMUST00000158950 136 ntBASIC2.18□□□□□ -2.06
Lire1P11260 Gm16162-201ENSMUST00000162296 297 ntBASIC2.18□□□□□ -2.06
Lire1P11260 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Lire1P11260 Gm22800-201ENSMUST00000175627 94 ntBASIC2.18□□□□□ -2.06
Lire1P11260 Gm29550-201ENSMUST00000185543 285 ntBASIC2.18□□□□□ -2.06
Lire1P11260 Gm18775-201ENSMUST00000190763 586 ntBASIC2.18□□□□□ -2.06
Lire1P11260 Gm17771-201ENSMUST00000194477 1147 ntBASIC2.18□□□□□ -2.06
Lire1P11260 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC2.18□□□□□ -2.06
Lire1P11260 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.18□□□□□ -2.06
Lire1P11260 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
Lire1P11260 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Lire1P11260 Gm23011-201ENSMUST00000104148 132 ntBASIC2.17□□□□□ -2.06
Lire1P11260 Gm24889-201ENSMUST00000104388 132 ntBASIC2.17□□□□□ -2.06
Lire1P11260 Gm14848-201ENSMUST00000121850 467 ntBASIC2.17□□□□□ -2.06
Lire1P11260 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.17□□□□□ -2.06
Lire1P11260 Gm6182-201ENSMUST00000156439 1208 ntBASIC2.17□□□□□ -2.06
Lire1P11260 Gm25115-201ENSMUST00000157187 140 ntBASIC2.17□□□□□ -2.06
Lire1P11260 Gm22257-201ENSMUST00000158687 301 ntBASIC2.17□□□□□ -2.06
Lire1P11260 Gm25162-201ENSMUST00000158906 159 ntBASIC2.17□□□□□ -2.06
Lire1P11260 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Lire1P11260 Gm29657-201ENSMUST00000189807 342 ntBASIC2.17□□□□□ -2.06
Lire1P11260 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.17□□□□□ -2.06
Lire1P11260 Gm43083-201ENSMUST00000199594 476 ntBASIC2.17□□□□□ -2.06
Lire1P11260 Gm17906-201ENSMUST00000202480 901 ntBASIC2.17□□□□□ -2.06
Lire1P11260 Gm5374-201ENSMUST00000222868 657 ntBASIC2.17□□□□□ -2.06
Lire1P11260 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Lire1P11260 Gm24313-201ENSMUST00000082561 133 ntBASIC2.17□□□□□ -2.06
Lire1P11260 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.17□□□□□ -2.06
Lire1P11260 Gm23951-201ENSMUST00000104029 132 ntBASIC2.16□□□□□ -2.06
Lire1P11260 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC2.16□□□□□ -2.06
Lire1P11260 Gm14793-201ENSMUST00000118739 311 ntBASIC2.16□□□□□ -2.06
Lire1P11260 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.16□□□□□ -2.06
Lire1P11260 Gm12721-201ENSMUST00000120621 268 ntBASIC2.16□□□□□ -2.06
Lire1P11260 Gm23983-201ENSMUST00000157142 114 ntBASIC2.16□□□□□ -2.06
Lire1P11260 Gm22768-201ENSMUST00000158366 153 ntBASIC2.16□□□□□ -2.06
Lire1P11260 Gm7925-201ENSMUST00000166690 401 ntBASIC2.16□□□□□ -2.06
Lire1P11260 Gm7953-201ENSMUST00000168278 469 ntBASIC2.16□□□□□ -2.06
Lire1P11260 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Lire1P11260 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Lire1P11260 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Lire1P11260 Mir6341-201ENSMUST00000183490 121 ntBASIC2.16□□□□□ -2.06
Lire1P11260 Gm2829-201ENSMUST00000213121 499 ntBASIC2.16□□□□□ -2.06
Lire1P11260 Gm2628-201ENSMUST00000218019 426 ntBASIC2.16□□□□□ -2.06
Lire1P11260 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Lire1P11260 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Lire1P11260 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.15□□□□□ -2.06
Lire1P11260 Gm14674-201ENSMUST00000117816 342 ntBASIC2.15□□□□□ -2.07
Lire1P11260 Gm15536-201ENSMUST00000121411 114 ntBASIC2.15□□□□□ -2.07
Lire1P11260 Gm25109-201ENSMUST00000122474 114 ntBASIC2.15□□□□□ -2.07
Lire1P11260 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.15□□□□□ -2.07
Lire1P11260 Gm26280-201ENSMUST00000157096 101 ntBASIC2.15□□□□□ -2.07
Lire1P11260 Gm23172-201ENSMUST00000157160 124 ntBASIC2.15□□□□□ -2.07
Lire1P11260 Gm22818-201ENSMUST00000157446 104 ntBASIC2.15□□□□□ -2.07
Lire1P11260 Gm24770-201ENSMUST00000158505 92 ntBASIC2.15□□□□□ -2.07
Lire1P11260 Gm3111-201ENSMUST00000167426 490 ntBASIC2.15□□□□□ -2.07
Lire1P11260 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.15□□□□□ -2.07
Lire1P11260 Gm44161-201ENSMUST00000203532 253 ntBASIC2.15□□□□□ -2.07
Lire1P11260 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.15□□□□□ -2.07
Lire1P11260 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.15□□□□□ -2.07
Lire1P11260 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms