Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
P04224 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.33□□□□□ -2.04
P04224 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.32□□□□□ -2.04
P04224 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
P04224 Gm24172-201ENSMUST00000104127 117 ntBASIC2.32□□□□□ -2.04
P04224 Mdga2-203ENSMUST00000113942 423 ntBASIC2.32□□□□□ -2.04
P04224 Gm13475-201ENSMUST00000119290 234 ntBASIC2.32□□□□□ -2.04
P04224 Gm14269-201ENSMUST00000120455 306 ntBASIC2.32□□□□□ -2.04
P04224 Gm14287-201ENSMUST00000121060 117 ntBASIC2.32□□□□□ -2.04
P04224 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.32□□□□□ -2.04
P04224 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC2.32□□□□□ -2.04
P04224 Gm23381-201ENSMUST00000157676 94 ntBASIC2.32□□□□□ -2.04
P04224 Gm24082-201ENSMUST00000175175 83 ntBASIC2.32□□□□□ -2.04
P04224 Mir6355-201ENSMUST00000183687 106 ntBASIC2.32□□□□□ -2.04
P04224 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.32□□□□□ -2.04
P04224 Gm28951-201ENSMUST00000190742 313 ntBASIC2.32□□□□□ -2.04
P04224 Gm32033-201ENSMUST00000193483 339 ntBASIC2.32□□□□□ -2.04
P04224 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
P04224 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.32□□□□□ -2.04
P04224 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.32□□□□□ -2.04
P04224 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.32□□□□□ -2.04
P04224 AC164297.5-201ENSMUST00000224365 198 ntBASIC2.32□□□□□ -2.04
P04224 AC183096.1-201ENSMUST00000226392 130 ntBASIC2.32□□□□□ -2.04
P04224 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.32□□□□□ -2.04
P04224 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
P04224 Gm26457-201ENSMUST00000082678 78 ntBASIC2.32□□□□□ -2.04
P04224 Gm23462-201ENSMUST00000083264 104 ntBASIC2.32□□□□□ -2.04
P04224 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
P04224 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.32□□□□□ -2.04
P04224 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
P04224 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.31□□□□□ -2.04
P04224 Gm13880-201ENSMUST00000118421 474 ntBASIC2.31□□□□□ -2.04
P04224 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
P04224 Gm23980-201ENSMUST00000157135 158 ntBASIC2.31□□□□□ -2.04
P04224 Gm24443-201ENSMUST00000157242 132 ntBASIC2.31□□□□□ -2.04
P04224 Gm25054-201ENSMUST00000157370 97 ntBASIC2.31□□□□□ -2.04
P04224 Gm20718-201ENSMUST00000176058 259 ntBASIC2.31□□□□□ -2.04
P04224 Gm19932-201ENSMUST00000177033 313 ntBASIC2.31□□□□□ -2.04
P04224 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
P04224 Gm27786-201ENSMUST00000184337 70 ntBASIC2.31□□□□□ -2.04
P04224 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.31□□□□□ -2.04
P04224 Gm7837-201ENSMUST00000190873 412 ntBASIC2.31□□□□□ -2.04
P04224 Gm37923-201ENSMUST00000191624 161 ntBASIC2.31□□□□□ -2.04
P04224 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.31□□□□□ -2.04
P04224 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
P04224 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.31□□□□□ -2.04
P04224 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.31□□□□□ -2.04
P04224 Gm44844-201ENSMUST00000207242 336 ntBASIC2.31□□□□□ -2.04
P04224 Gm18346-201ENSMUST00000216782 325 ntBASIC2.31□□□□□ -2.04
P04224 Gm40810-201ENSMUST00000219149 253 ntBASIC2.31□□□□□ -2.04
P04224 Gm6109-201ENSMUST00000223297 348 ntBASIC2.31□□□□□ -2.04
P04224 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
P04224 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
P04224 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.31□□□□□ -2.04
P04224 Gm23453-201ENSMUST00000083326 106 ntBASIC2.31□□□□□ -2.04
P04224 Gm25207-201ENSMUST00000093745 107 ntBASIC2.31□□□□□ -2.04
P04224 Gm22939-201ENSMUST00000103958 131 ntBASIC2.3□□□□□ -2.04
P04224 Gm24282-201ENSMUST00000104232 66 ntBASIC2.3□□□□□ -2.04
P04224 Snord98-201ENSMUST00000116819 65 ntBASIC2.3□□□□□ -2.04
P04224 Gm22678-201ENSMUST00000116974 101 ntBASIC2.3□□□□□ -2.04
P04224 Gm13504-201ENSMUST00000117490 316 ntBASIC2.3□□□□□ -2.04
P04224 Gm7164-201ENSMUST00000117503 450 ntBASIC2.3□□□□□ -2.04
P04224 Gm12697-201ENSMUST00000118008 667 ntBASIC2.3□□□□□ -2.04
P04224 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
P04224 Gm25625-201ENSMUST00000157221 96 ntBASIC2.3□□□□□ -2.04
P04224 Gm23223-201ENSMUST00000158119 127 ntBASIC2.3□□□□□ -2.04
P04224 Gm25711-201ENSMUST00000158633 128 ntBASIC2.3□□□□□ -2.04
P04224 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.3□□□□□ -2.04
P04224 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.3□□□□□ -2.04
P04224 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
P04224 Gm25457-201ENSMUST00000179509 107 ntBASIC2.3□□□□□ -2.04
P04224 Gm25121-201ENSMUST00000179846 79 ntBASIC2.3□□□□□ -2.04
P04224 Mir6376-201ENSMUST00000185149 131 ntBASIC2.3□□□□□ -2.04
P04224 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
P04224 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
P04224 Gm28358-202ENSMUST00000189292 223 ntBASIC2.3□□□□□ -2.04
P04224 Gm45730-201ENSMUST00000212560 395 ntBASIC2.3□□□□□ -2.04
P04224 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.3□□□□□ -2.04
P04224 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.3□□□□□ -2.04
P04224 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.3□□□□□ -2.04
P04224 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
P04224 Gm24623-201ENSMUST00000082616 194 ntBASIC2.3□□□□□ -2.04
P04224 Gm22866-201ENSMUST00000083947 177 ntBASIC2.3□□□□□ -2.04
P04224 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.3□□□□□ -2.04
P04224 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.3□□□□□ -2.04
P04224 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.3□□□□□ -2.04
P04224 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.3□□□□□ -2.04
P04224 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
P04224 Gm13672-201ENSMUST00000117554 459 ntBASIC2.29□□□□□ -2.04
P04224 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.29□□□□□ -2.04
P04224 Gm15272-201ENSMUST00000120865 233 ntBASIC2.29□□□□□ -2.04
P04224 Gm25321-201ENSMUST00000122558 102 ntBASIC2.29□□□□□ -2.04
P04224 Gm25961-201ENSMUST00000157174 135 ntBASIC2.29□□□□□ -2.04
P04224 Gm24787-201ENSMUST00000157380 123 ntBASIC2.29□□□□□ -2.04
P04224 Gm24681-201ENSMUST00000158760 107 ntBASIC2.29□□□□□ -2.04
P04224 Gm24388-201ENSMUST00000177872 107 ntBASIC2.29□□□□□ -2.04
P04224 Gm21638-201ENSMUST00000179473 836 ntBASIC2.29□□□□□ -2.04
P04224 Gm27991-201ENSMUST00000184804 137 ntBASIC2.29□□□□□ -2.04
P04224 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
P04224 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms