Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm12617-201ENSMUST00000121268 381 ntBASIC3.23□□□□□ -1.89
Best1O88870 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.23□□□□□ -1.89
Best1O88870 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.23□□□□□ -1.89
Best1O88870 Gm28314-201ENSMUST00000191276 345 ntBASIC3.23□□□□□ -1.89
Best1O88870 Gm37085-201ENSMUST00000193780 196 ntBASIC3.23□□□□□ -1.89
Best1O88870 Gm44425-201ENSMUST00000203739 429 ntBASIC3.23□□□□□ -1.89
Best1O88870 Gm44811-201ENSMUST00000209120 228 ntBASIC3.23□□□□□ -1.89
Best1O88870 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC3.23□□□□□ -1.89
Best1O88870 Gm39147-201ENSMUST00000211376 465 ntBASIC3.23□□□□□ -1.89
Best1O88870 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Best1O88870 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Best1O88870 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Best1O88870 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.23□□□□□ -1.89
Best1O88870 Gm14296-202ENSMUST00000108931 750 ntBASIC3.22□□□□□ -1.89
Best1O88870 Gm12858-201ENSMUST00000121913 208 ntBASIC3.22□□□□□ -1.89
Best1O88870 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.22□□□□□ -1.89
Best1O88870 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.22□□□□□ -1.89
Best1O88870 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.22□□□□□ -1.89
Best1O88870 Gm28008-201ENSMUST00000184021 186 ntBASIC3.22□□□□□ -1.89
Best1O88870 Gm38311-201ENSMUST00000192945 165 ntBASIC3.22□□□□□ -1.89
Best1O88870 Gm37104-201ENSMUST00000193278 196 ntBASIC3.22□□□□□ -1.89
Best1O88870 Gm44343-201ENSMUST00000196702 90 ntBASIC3.22□□□□□ -1.89
Best1O88870 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.22□□□□□ -1.89
Best1O88870 Gm43600-201ENSMUST00000202134 223 ntBASIC3.22□□□□□ -1.89
Best1O88870 Gm43932-201ENSMUST00000204499 52 ntBASIC3.22□□□□□ -1.89
Best1O88870 Gm44858-201ENSMUST00000207360 154 ntBASIC3.22□□□□□ -1.89
Best1O88870 Gm18991-201ENSMUST00000209225 746 ntBASIC3.22□□□□□ -1.89
Best1O88870 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.22□□□□□ -1.89
Best1O88870 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.22□□□□□ -1.89
Best1O88870 AC160962.2-201ENSMUST00000224761 632 ntBASIC3.22□□□□□ -1.89
Best1O88870 Gm25199-201ENSMUST00000083095 104 ntBASIC3.22□□□□□ -1.89
Best1O88870 Gm25512-201ENSMUST00000083863 107 ntBASIC3.22□□□□□ -1.89
Best1O88870 Gm37761-201ENSMUST00000194989 2098 ntBASIC3.22□□□□□ -1.89
Best1O88870 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Best1O88870 Gm42755-201ENSMUST00000198533 1493 ntBASIC3.22□□□□□ -1.89
Best1O88870 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.21□□□□□ -1.89
Best1O88870 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Best1O88870 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Best1O88870 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Best1O88870 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.21□□□□□ -1.9
Best1O88870 Gm13518-201ENSMUST00000120018 233 ntBASIC3.21□□□□□ -1.9
Best1O88870 Gm14678-201ENSMUST00000121396 482 ntBASIC3.21□□□□□ -1.9
Best1O88870 Gm25269-201ENSMUST00000122601 104 ntBASIC3.21□□□□□ -1.9
Best1O88870 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Best1O88870 Trav15d-3-201ENSMUST00000198604 167 ntBASIC3.21□□□□□ -1.9
Best1O88870 Gm44024-201ENSMUST00000203008 476 ntBASIC3.21□□□□□ -1.9
Best1O88870 Gm44010-201ENSMUST00000204432 331 ntBASIC3.21□□□□□ -1.9
Best1O88870 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.21□□□□□ -1.9
Best1O88870 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Best1O88870 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.21□□□□□ -1.9
Best1O88870 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Best1O88870 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Best1O88870 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Best1O88870 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
Best1O88870 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
Best1O88870 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Best1O88870 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Best1O88870 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
Best1O88870 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Best1O88870 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Best1O88870 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Best1O88870 Gm23142-201ENSMUST00000101848 105 ntBASIC3.2□□□□□ -1.9
Best1O88870 Gm26240-201ENSMUST00000101893 105 ntBASIC3.2□□□□□ -1.9
Best1O88870 Gm25526-201ENSMUST00000104332 132 ntBASIC3.2□□□□□ -1.9
Best1O88870 Gm15190-201ENSMUST00000120855 276 ntBASIC3.2□□□□□ -1.9
Best1O88870 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Best1O88870 Gm23921-201ENSMUST00000175258 107 ntBASIC3.2□□□□□ -1.9
Best1O88870 Mir5127-201ENSMUST00000175295 71 ntBASIC3.2□□□□□ -1.9
Best1O88870 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Best1O88870 Gm44083-201ENSMUST00000203114 337 ntBASIC3.2□□□□□ -1.9
Best1O88870 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Best1O88870 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC3.2□□□□□ -1.9
Best1O88870 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.2□□□□□ -1.9
Best1O88870 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.2□□□□□ -1.9
Best1O88870 Mir496a-201ENSMUST00000093627 79 ntBASIC3.2□□□□□ -1.9
Best1O88870 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Best1O88870 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.2□□□□□ -1.9
Best1O88870 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Best1O88870 Gm26423-201ENSMUST00000104277 128 ntBASIC3.19□□□□□ -1.9
Best1O88870 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC3.19□□□□□ -1.9
Best1O88870 Gm14770-201ENSMUST00000122197 312 ntBASIC3.19□□□□□ -1.9
Best1O88870 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Best1O88870 Gm28848-201ENSMUST00000189984 168 ntBASIC3.19□□□□□ -1.9
Best1O88870 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.19□□□□□ -1.9
Best1O88870 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.19□□□□□ -1.9
Best1O88870 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.19□□□□□ -1.9
Best1O88870 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.19□□□□□ -1.9
Best1O88870 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.19□□□□□ -1.9
Best1O88870 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Best1O88870 CT030166.2-201ENSMUST00000222021 368 ntBASIC3.19□□□□□ -1.9
Best1O88870 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.19□□□□□ -1.9
Best1O88870 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Best1O88870 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Best1O88870 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Best1O88870 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Best1O88870 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Best1O88870 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Best1O88870 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.18□□□□□ -1.9
Best1O88870 Gm13378-201ENSMUST00000117483 336 ntBASIC3.18□□□□□ -1.9
Best1O88870 Snord11-201ENSMUST00000158468 84 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms