Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm14551-201ENSMUST00000120802 256 ntBASIC2.25□□□□□ -2.05
ClppO88696 Gm22382-201ENSMUST00000158185 130 ntBASIC2.25□□□□□ -2.05
ClppO88696 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.25□□□□□ -2.05
ClppO88696 Gm7065-201ENSMUST00000222150 474 ntBASIC2.25□□□□□ -2.05
ClppO88696 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.25□□□□□ -2.05
ClppO88696 Mir10a-201ENSMUST00000083585 110 ntBASIC2.25□□□□□ -2.05
ClppO88696 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
ClppO88696 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.24□□□□□ -2.05
ClppO88696 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ClppO88696 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ClppO88696 Gm22834-201ENSMUST00000102021 79 ntBASIC2.24□□□□□ -2.05
ClppO88696 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
ClppO88696 Gm12721-201ENSMUST00000120621 268 ntBASIC2.24□□□□□ -2.05
ClppO88696 Gm13862-201ENSMUST00000121220 197 ntBASIC2.24□□□□□ -2.05
ClppO88696 Gm12779-201ENSMUST00000121496 143 ntBASIC2.24□□□□□ -2.05
ClppO88696 Gm23184-201ENSMUST00000122594 131 ntBASIC2.24□□□□□ -2.05
ClppO88696 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.24□□□□□ -2.05
ClppO88696 Gm22257-201ENSMUST00000158687 301 ntBASIC2.24□□□□□ -2.05
ClppO88696 Gm23196-201ENSMUST00000158806 107 ntBASIC2.24□□□□□ -2.05
ClppO88696 Gm23725-201ENSMUST00000177876 107 ntBASIC2.24□□□□□ -2.05
ClppO88696 Gm21729-201ENSMUST00000180058 664 ntBASIC2.24□□□□□ -2.05
ClppO88696 Gm21853-201ENSMUST00000180071 664 ntBASIC2.24□□□□□ -2.05
ClppO88696 Gm26622-201ENSMUST00000180520 298 ntBASIC2.24□□□□□ -2.05
ClppO88696 Gm27236-201ENSMUST00000184147 442 ntBASIC2.24□□□□□ -2.05
ClppO88696 Gm29495-201ENSMUST00000189319 664 ntBASIC2.24□□□□□ -2.05
ClppO88696 Gm37119-201ENSMUST00000195691 389 ntBASIC2.24□□□□□ -2.05
ClppO88696 Gm18696-201ENSMUST00000220103 274 ntBASIC2.24□□□□□ -2.05
ClppO88696 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.24□□□□□ -2.05
ClppO88696 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ClppO88696 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ClppO88696 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
ClppO88696 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ClppO88696 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
ClppO88696 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
ClppO88696 Gm23551-201ENSMUST00000116852 121 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm15714-201ENSMUST00000117168 250 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm12871-201ENSMUST00000118758 438 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.23□□□□□ -2.05
ClppO88696 Gm24601-201ENSMUST00000157970 143 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm22389-201ENSMUST00000158193 301 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm22527-201ENSMUST00000158816 106 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm16561-201ENSMUST00000163001 192 ntBASIC2.23□□□□□ -2.05
ClppO88696 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm25642-201ENSMUST00000175137 66 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm26335-201ENSMUST00000178449 107 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm23523-201ENSMUST00000180190 107 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm3852-201ENSMUST00000182781 264 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm27761-201ENSMUST00000184091 131 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.23□□□□□ -2.05
ClppO88696 Gm44459-201ENSMUST00000203926 160 ntBASIC2.23□□□□□ -2.05
ClppO88696 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm9377-201ENSMUST00000207227 623 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm44825-201ENSMUST00000207557 150 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm44598-201ENSMUST00000207566 150 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.23□□□□□ -2.05
ClppO88696 Gm8940-201ENSMUST00000212585 219 ntBASIC2.23□□□□□ -2.05
ClppO88696 AC120394.1-201ENSMUST00000217153 351 ntBASIC2.23□□□□□ -2.05
ClppO88696 Gm29809-201ENSMUST00000218423 493 ntBASIC2.23□□□□□ -2.05
ClppO88696 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ClppO88696 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.23□□□□□ -2.05
ClppO88696 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.23□□□□□ -2.05
ClppO88696 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ClppO88696 Gm24313-201ENSMUST00000082561 133 ntBASIC2.23□□□□□ -2.05
ClppO88696 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ClppO88696 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.22□□□□□ -2.05
ClppO88696 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
ClppO88696 Gm14670-201ENSMUST00000117327 337 ntBASIC2.22□□□□□ -2.05
ClppO88696 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.22□□□□□ -2.05
ClppO88696 Gm22199-201ENSMUST00000122660 126 ntBASIC2.22□□□□□ -2.05
ClppO88696 Gm23000-201ENSMUST00000157083 139 ntBASIC2.22□□□□□ -2.05
ClppO88696 Gm26105-201ENSMUST00000157253 190 ntBASIC2.22□□□□□ -2.05
ClppO88696 Gm24551-201ENSMUST00000158645 92 ntBASIC2.22□□□□□ -2.05
ClppO88696 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
ClppO88696 Gm23813-201ENSMUST00000175153 77 ntBASIC2.22□□□□□ -2.05
ClppO88696 Gm20689-201ENSMUST00000176033 279 ntBASIC2.22□□□□□ -2.05
ClppO88696 Gm24304-201ENSMUST00000177635 107 ntBASIC2.22□□□□□ -2.05
ClppO88696 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
ClppO88696 Gm29231-201ENSMUST00000179850 319 ntBASIC2.22□□□□□ -2.05
ClppO88696 Gm27399-201ENSMUST00000184250 78 ntBASIC2.22□□□□□ -2.05
ClppO88696 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ClppO88696 Gm44477-201ENSMUST00000199661 110 ntBASIC2.22□□□□□ -2.05
ClppO88696 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ClppO88696 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.22□□□□□ -2.05
ClppO88696 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.22□□□□□ -2.05
ClppO88696 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.22□□□□□ -2.05
ClppO88696 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.21□□□□□ -2.06
ClppO88696 Gm12235-201ENSMUST00000118596 170 ntBASIC2.21□□□□□ -2.06
ClppO88696 Gm11522-201ENSMUST00000120533 176 ntBASIC2.21□□□□□ -2.06
ClppO88696 Gm12872-201ENSMUST00000121835 320 ntBASIC2.21□□□□□ -2.06
ClppO88696 Gm25325-201ENSMUST00000122559 86 ntBASIC2.21□□□□□ -2.06
ClppO88696 Gm14364-201ENSMUST00000129209 267 ntBASIC2.21□□□□□ -2.06
ClppO88696 Gm26280-201ENSMUST00000157096 101 ntBASIC2.21□□□□□ -2.06
ClppO88696 Gm25392-201ENSMUST00000157335 297 ntBASIC2.21□□□□□ -2.06
ClppO88696 Gm24997-201ENSMUST00000157910 105 ntBASIC2.21□□□□□ -2.06
ClppO88696 Gm24846-201ENSMUST00000158033 108 ntBASIC2.21□□□□□ -2.06
ClppO88696 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ClppO88696 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.21□□□□□ -2.06
ClppO88696 Gm31123-201ENSMUST00000192094 666 ntBASIC2.21□□□□□ -2.06
ClppO88696 Mir691-201ENSMUST00000199719 78 ntBASIC2.21□□□□□ -2.06
ClppO88696 Gm42739-201ENSMUST00000200687 226 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms