Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.09□□□□□ -2.23
Sdc4O35988 Gm22944-201ENSMUST00000158662 133 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 Gm26363-201ENSMUST00000158866 83 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 Gm25175-201ENSMUST00000178712 79 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 Gm28825-201ENSMUST00000186233 238 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Sdc4O35988 Gm37743-201ENSMUST00000194645 376 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 Gm43739-201ENSMUST00000198294 307 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 Gm18252-203ENSMUST00000215855 757 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 Gm10298-201ENSMUST00000074801 265 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Gm13603-201ENSMUST00000119404 83 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Gm24379-201ENSMUST00000122695 86 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Gm23713-201ENSMUST00000157353 70 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Gm22615-201ENSMUST00000158102 70 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.08□□□□□ -2.24
Sdc4O35988 Gm7953-201ENSMUST00000168278 469 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Gm18397-201ENSMUST00000176704 587 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Gm21726-201ENSMUST00000179654 392 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Sdc4O35988 Gm27676-201ENSMUST00000183669 61 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Gm27419-201ENSMUST00000184576 109 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.08□□□□□ -2.24
Sdc4O35988 Gm28404-201ENSMUST00000190242 453 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Sdc4O35988 Gm25853-201ENSMUST00000082793 132 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Gm25403-201ENSMUST00000082971 143 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Snora3-201ENSMUST00000083082 132 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Gm22974-201ENSMUST00000083301 103 ntBASIC1.08□□□□□ -2.24
Sdc4O35988 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Sdc4O35988 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.07□□□□□ -2.24
Sdc4O35988 Gm25213-201ENSMUST00000102388 113 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 Gm16053-201ENSMUST00000120511 188 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 Gm22339-201ENSMUST00000157718 62 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 Gm24677-201ENSMUST00000158755 150 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 Gm24333-201ENSMUST00000175101 84 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 Gm6660-201ENSMUST00000179149 468 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Sdc4O35988 Gm42960-201ENSMUST00000202160 241 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 Gm29754-201ENSMUST00000206269 358 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 Gm44961-201ENSMUST00000207450 196 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 AC124569.1-201ENSMUST00000225932 101 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 Gm23245-201ENSMUST00000083370 135 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 Gm10780-201ENSMUST00000099459 285 ntBASIC1.07□□□□□ -2.24
Sdc4O35988 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Sdc4O35988 Gm25759-201ENSMUST00000103988 129 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 Gm22673-201ENSMUST00000104415 131 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 Gm11065-201ENSMUST00000111462 228 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 Gm6587-201ENSMUST00000120219 613 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 Gm13903-201ENSMUST00000120945 193 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 Mir1904-201ENSMUST00000122702 80 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 Gm24632-201ENSMUST00000122770 323 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 Snord87-201ENSMUST00000175437 87 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 Gm29231-201ENSMUST00000179850 319 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 Gm45207-201ENSMUST00000207469 145 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 Gm7692-201ENSMUST00000213534 409 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 Gm21089-201ENSMUST00000215843 325 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.06□□□□□ -2.24
Sdc4O35988 Mir22-201ENSMUST00000083595 95 ntBASIC1.06□□□□□ -2.24
Sdc4O35988 Gm15211-201ENSMUST00000118932 528 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Gm23381-201ENSMUST00000157676 94 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Gm25454-201ENSMUST00000157947 315 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Gm25715-201ENSMUST00000158627 125 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Mir3086-201ENSMUST00000175072 87 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.05□□□□□ -2.24
Sdc4O35988 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
Sdc4O35988 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC1.05□□□□□ -2.24
Sdc4O35988 Gm27878-201ENSMUST00000184000 106 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Gm27656-201ENSMUST00000185055 80 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Gm31520-201ENSMUST00000203048 733 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Gm17991-201ENSMUST00000208139 297 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Gm45912-201ENSMUST00000210646 543 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Gm45730-201ENSMUST00000212560 395 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Gm23100-201ENSMUST00000083455 141 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Gm23733-201ENSMUST00000083750 106 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Sdc4O35988 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.05□□□□□ -2.24
Sdc4O35988 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.05□□□□□ -2.24
Sdc4O35988 Mir883a-201ENSMUST00000104824 76 ntBASIC1.04□□□□□ -2.24
Sdc4O35988 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.04□□□□□ -2.24
Sdc4O35988 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC1.04□□□□□ -2.24
Sdc4O35988 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC1.04□□□□□ -2.24
Sdc4O35988 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.04□□□□□ -2.24
Sdc4O35988 Gm3333-202ENSMUST00000221763 1044 ntBASIC1.04□□□□□ -2.24
Sdc4O35988 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms