Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm25308-201ENSMUST00000104171 158 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Gm12934-201ENSMUST00000119221 343 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Gm24716-201ENSMUST00000157524 104 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Gm24504-201ENSMUST00000157679 100 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Gm24056-201ENSMUST00000158617 146 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Gm16038-201ENSMUST00000159317 193 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Mir6370-201ENSMUST00000183510 120 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Gm27783-201ENSMUST00000183534 105 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Gm28016-201ENSMUST00000184594 196 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Gm28418-201ENSMUST00000186179 423 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Gm37007-201ENSMUST00000194234 319 ntBASIC2.76□□□□□ -1.97
Clk3O35492 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Gm37404-201ENSMUST00000195726 359 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.76□□□□□ -1.97
Clk3O35492 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.76□□□□□ -1.97
Clk3O35492 Gm44223-201ENSMUST00000204854 114 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.76□□□□□ -1.97
Clk3O35492 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.76□□□□□ -1.97
Clk3O35492 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Olfr197-201ENSMUST00000080031 926 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Gm23297-201ENSMUST00000083184 127 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Clk3O35492 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Clk3O35492 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
Clk3O35492 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Clk3O35492 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Clk3O35492 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Clk3O35492 Gm24172-201ENSMUST00000104127 117 ntBASIC2.75□□□□□ -1.97
Clk3O35492 Gm22023-201ENSMUST00000104354 130 ntBASIC2.75□□□□□ -1.97
Clk3O35492 Mir878-201ENSMUST00000104680 78 ntBASIC2.75□□□□□ -1.97
Clk3O35492 Gm15844-201ENSMUST00000118016 576 ntBASIC2.75□□□□□ -1.97
Clk3O35492 Gm7209-201ENSMUST00000122339 333 ntBASIC2.75□□□□□ -1.97
Clk3O35492 Gm14389-201ENSMUST00000140453 241 ntBASIC2.75□□□□□ -1.97
Clk3O35492 Gm24787-201ENSMUST00000157380 123 ntBASIC2.75□□□□□ -1.97
Clk3O35492 Gm22389-201ENSMUST00000158193 301 ntBASIC2.75□□□□□ -1.97
Clk3O35492 Gm24736-201ENSMUST00000158862 130 ntBASIC2.75□□□□□ -1.97
Clk3O35492 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Clk3O35492 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Clk3O35492 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Clk3O35492 Gm17522-201ENSMUST00000178144 498 ntBASIC2.75□□□□□ -1.97
Clk3O35492 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Clk3O35492 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Clk3O35492 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Clk3O35492 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.75□□□□□ -1.97
Clk3O35492 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.75□□□□□ -1.97
Clk3O35492 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.75□□□□□ -1.97
Clk3O35492 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.75□□□□□ -1.97
Clk3O35492 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Clk3O35492 Gm26457-201ENSMUST00000082678 78 ntBASIC2.75□□□□□ -1.97
Clk3O35492 Gm22287-201ENSMUST00000083197 107 ntBASIC2.75□□□□□ -1.97
Clk3O35492 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Clk3O35492 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Clk3O35492 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
Clk3O35492 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Clk3O35492 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Clk3O35492 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Snord14c-201ENSMUST00000101927 86 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Gm13329-201ENSMUST00000117063 265 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Gm12876-201ENSMUST00000120975 408 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.74□□□□□ -1.97
Clk3O35492 Gm24908-201ENSMUST00000157294 127 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Gm23829-201ENSMUST00000157392 270 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Gm22654-201ENSMUST00000157874 105 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Gm18520-201ENSMUST00000174783 658 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Gm25121-201ENSMUST00000179846 79 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Mir6386-201ENSMUST00000183558 104 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Mir7667-201ENSMUST00000183866 63 ntBASIC2.74□□□□□ -1.97
Clk3O35492 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Clk3O35492 Gm43739-201ENSMUST00000198294 307 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Gm43217-201ENSMUST00000199513 367 ntBASIC2.74□□□□□ -1.97
Clk3O35492 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.74□□□□□ -1.97
Clk3O35492 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.74□□□□□ -1.97
Clk3O35492 Gm44881-201ENSMUST00000205425 367 ntBASIC2.74□□□□□ -1.97
Clk3O35492 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.74□□□□□ -1.97
Clk3O35492 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Clk3O35492 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Clk3O35492 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Clk3O35492 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Clk3O35492 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Clk3O35492 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Clk3O35492 Mir499-201ENSMUST00000102357 79 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm14296-202ENSMUST00000108931 750 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm13504-201ENSMUST00000117490 316 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm13396-201ENSMUST00000120617 271 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm15466-201ENSMUST00000122299 333 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm22534-201ENSMUST00000158173 104 ntBASIC2.73□□□□□ -1.97
Clk3O35492 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Clk3O35492 Gm25284-201ENSMUST00000180345 141 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm27410-201ENSMUST00000183851 115 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Mir6346-201ENSMUST00000183982 81 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gm27640-201ENSMUST00000184580 147 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.73□□□□□ -1.97
Clk3O35492 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms