Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Ercc2O08811 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.67□□□□□ -1.98
Ercc2O08811 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.67□□□□□ -1.98
Ercc2O08811 Gm22858-201ENSMUST00000174972 76 ntBASIC2.67□□□□□ -1.98
Ercc2O08811 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.67□□□□□ -1.98
Ercc2O08811 Gm23933-201ENSMUST00000178405 79 ntBASIC2.67□□□□□ -1.98
Ercc2O08811 Gm28282-201ENSMUST00000186072 186 ntBASIC2.67□□□□□ -1.98
Ercc2O08811 Gm28825-201ENSMUST00000186233 238 ntBASIC2.67□□□□□ -1.98
Ercc2O08811 Gm20058-201ENSMUST00000186939 284 ntBASIC2.67□□□□□ -1.98
Ercc2O08811 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.67□□□□□ -1.98
Ercc2O08811 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.67□□□□□ -1.98
Ercc2O08811 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.67□□□□□ -1.98
Ercc2O08811 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.67□□□□□ -1.98
Ercc2O08811 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.67□□□□□ -1.98
Ercc2O08811 Gm23404-201ENSMUST00000082543 97 ntBASIC2.67□□□□□ -1.98
Ercc2O08811 Gm24765-201ENSMUST00000083691 103 ntBASIC2.67□□□□□ -1.98
Ercc2O08811 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ercc2O08811 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.67□□□□□ -1.98
Ercc2O08811 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Ercc2O08811 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ercc2O08811 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ercc2O08811 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.67□□□□□ -1.98
Ercc2O08811 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Ercc2O08811 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Ercc2O08811 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Ercc2O08811 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Ercc2O08811 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Ercc2O08811 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.66□□□□□ -1.98
Ercc2O08811 Gm23987-201ENSMUST00000117039 129 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Gm15183-201ENSMUST00000118933 348 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Gm12042-201ENSMUST00000120479 301 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Gm24499-201ENSMUST00000158446 104 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Gm25162-201ENSMUST00000158906 159 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Gm15900-201ENSMUST00000161584 342 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Gm7925-201ENSMUST00000166690 401 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Gm3027-201ENSMUST00000167579 451 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Mir8103-201ENSMUST00000183945 107 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Gm37128-201ENSMUST00000192599 232 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Gm37361-201ENSMUST00000194345 132 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Gm9377-201ENSMUST00000207227 623 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 mt-Tr-201ENSMUST00000082412 68 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Gm25801-201ENSMUST00000082638 106 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Gm23247-201ENSMUST00000083373 107 ntBASIC2.66□□□□□ -1.98
Ercc2O08811 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Ercc2O08811 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.66□□□□□ -1.98
Ercc2O08811 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Ercc2O08811 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
Ercc2O08811 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Ercc2O08811 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Ercc2O08811 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Ercc2O08811 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.65□□□□□ -1.98
Ercc2O08811 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Ercc2O08811 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Mir466k-201ENSMUST00000116774 122 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Gm24908-201ENSMUST00000157294 127 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Gm24857-201ENSMUST00000158061 310 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.65□□□□□ -1.99
Ercc2O08811 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Gm5224-201ENSMUST00000183060 350 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Mir6370-201ENSMUST00000183510 120 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Gm27379-201ENSMUST00000183730 123 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Mir7667-201ENSMUST00000183866 63 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.65□□□□□ -1.99
Ercc2O08811 Gm28740-201ENSMUST00000186142 215 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.65□□□□□ -1.99
Ercc2O08811 Gm18453-201ENSMUST00000208000 626 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Gm45879-201ENSMUST00000212521 392 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Gm22620-201ENSMUST00000082700 133 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Gm22443-201ENSMUST00000082890 107 ntBASIC2.65□□□□□ -1.99
Ercc2O08811 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Ercc2O08811 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
Ercc2O08811 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Ercc2O08811 Mir669l-201ENSMUST00000103771 98 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm13457-201ENSMUST00000117885 267 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm11598-201ENSMUST00000119257 357 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Ercc2O08811 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm23557-201ENSMUST00000157820 138 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm23641-201ENSMUST00000157857 101 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm25982-201ENSMUST00000157920 101 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm28838-201ENSMUST00000186338 315 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm29635-201ENSMUST00000187221 315 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm29026-201ENSMUST00000187787 315 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm28647-201ENSMUST00000188416 197 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm28797-201ENSMUST00000188543 315 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm28855-201ENSMUST00000188680 315 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm28705-201ENSMUST00000189548 315 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm28939-201ENSMUST00000190351 315 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm28223-201ENSMUST00000190469 315 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm29092-201ENSMUST00000190768 315 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Gm19572-201ENSMUST00000214326 338 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.64□□□□□ -1.99
Ercc2O08811 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Ercc2O08811 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Ercc2O08811 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms