Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
ClockO08785 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.78□□□□□ -2.12
ClockO08785 Gm25658-201ENSMUST00000158472 128 ntBASIC1.78□□□□□ -2.12
ClockO08785 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ClockO08785 Gm37533-201ENSMUST00000193848 545 ntBASIC1.78□□□□□ -2.12
ClockO08785 Gm43582-201ENSMUST00000196149 343 ntBASIC1.78□□□□□ -2.12
ClockO08785 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.78□□□□□ -2.12
ClockO08785 Gm44477-201ENSMUST00000199661 110 ntBASIC1.78□□□□□ -2.12
ClockO08785 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.78□□□□□ -2.12
ClockO08785 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
ClockO08785 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.78□□□□□ -2.12
ClockO08785 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.78□□□□□ -2.12
ClockO08785 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
ClockO08785 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.77□□□□□ -2.13
ClockO08785 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
ClockO08785 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ClockO08785 Gm25876-201ENSMUST00000104329 119 ntBASIC1.77□□□□□ -2.13
ClockO08785 Gm12871-201ENSMUST00000118758 438 ntBASIC1.77□□□□□ -2.13
ClockO08785 Gm12304-201ENSMUST00000120312 385 ntBASIC1.77□□□□□ -2.13
ClockO08785 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.77□□□□□ -2.13
ClockO08785 Gm23317-201ENSMUST00000157999 129 ntBASIC1.77□□□□□ -2.13
ClockO08785 Gm24837-201ENSMUST00000158683 81 ntBASIC1.77□□□□□ -2.13
ClockO08785 Gm5277-201ENSMUST00000164923 556 ntBASIC1.77□□□□□ -2.13
ClockO08785 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.77□□□□□ -2.13
ClockO08785 Gm22851-201ENSMUST00000178741 94 ntBASIC1.77□□□□□ -2.13
ClockO08785 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
ClockO08785 Gm25074-201ENSMUST00000178782 94 ntBASIC1.77□□□□□ -2.13
ClockO08785 Gm29231-201ENSMUST00000179850 319 ntBASIC1.77□□□□□ -2.13
ClockO08785 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
ClockO08785 Gm37727-201ENSMUST00000191637 819 ntBASIC1.77□□□□□ -2.13
ClockO08785 Gm37778-201ENSMUST00000191732 190 ntBASIC1.77□□□□□ -2.13
ClockO08785 Gm45386-201ENSMUST00000210194 218 ntBASIC1.77□□□□□ -2.13
ClockO08785 Gm45754-201ENSMUST00000212380 279 ntBASIC1.77□□□□□ -2.13
ClockO08785 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.77□□□□□ -2.13
ClockO08785 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.77□□□□□ -2.13
ClockO08785 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ClockO08785 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ClockO08785 Gm25698-201ENSMUST00000082897 107 ntBASIC1.77□□□□□ -2.13
ClockO08785 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
ClockO08785 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
ClockO08785 Gm23422-201ENSMUST00000102000 107 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm24889-201ENSMUST00000104388 132 ntBASIC1.76□□□□□ -2.13
ClockO08785 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm13728-201ENSMUST00000117471 400 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm13885-201ENSMUST00000117569 187 ntBASIC1.76□□□□□ -2.13
ClockO08785 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm14366-201ENSMUST00000121970 730 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm22257-201ENSMUST00000158687 301 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm26157-201ENSMUST00000158974 126 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
ClockO08785 Gm22192-201ENSMUST00000175128 85 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm23144-201ENSMUST00000180226 107 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm9892-201ENSMUST00000182415 992 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm27588-201ENSMUST00000185096 263 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm18356-201ENSMUST00000185677 623 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm28058-201ENSMUST00000186421 264 ntBASIC1.76□□□□□ -2.13
ClockO08785 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm35212-201ENSMUST00000196672 606 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm43680-201ENSMUST00000199466 340 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm42807-201ENSMUST00000200141 329 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.76□□□□□ -2.13
ClockO08785 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.76□□□□□ -2.13
ClockO08785 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.76□□□□□ -2.13
ClockO08785 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm25632-201ENSMUST00000083112 85 ntBASIC1.76□□□□□ -2.13
ClockO08785 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.76□□□□□ -2.13
ClockO08785 Gm26384-201ENSMUST00000102183 110 ntBASIC1.75□□□□□ -2.13
ClockO08785 Gm26342-201ENSMUST00000104557 129 ntBASIC1.75□□□□□ -2.13
ClockO08785 Gm23551-201ENSMUST00000116852 121 ntBASIC1.75□□□□□ -2.13
ClockO08785 Gm22678-201ENSMUST00000116974 101 ntBASIC1.75□□□□□ -2.13
ClockO08785 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.75□□□□□ -2.13
ClockO08785 Gm13804-201ENSMUST00000119552 172 ntBASIC1.75□□□□□ -2.13
ClockO08785 Gm15536-201ENSMUST00000121411 114 ntBASIC1.75□□□□□ -2.13
ClockO08785 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ClockO08785 Gm24478-201ENSMUST00000157439 158 ntBASIC1.75□□□□□ -2.13
ClockO08785 Gm24885-201ENSMUST00000158783 270 ntBASIC1.75□□□□□ -2.13
ClockO08785 Gm25707-201ENSMUST00000175120 96 ntBASIC1.75□□□□□ -2.13
ClockO08785 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.75□□□□□ -2.13
ClockO08785 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.75□□□□□ -2.13
ClockO08785 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.75□□□□□ -2.13
ClockO08785 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.75□□□□□ -2.13
ClockO08785 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.75□□□□□ -2.13
ClockO08785 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ClockO08785 Mir29c-201ENSMUST00000083614 88 ntBASIC1.75□□□□□ -2.13
ClockO08785 Gm12393-201ENSMUST00000117084 848 ntBASIC1.74□□□□□ -2.13
ClockO08785 Gm8858-201ENSMUST00000118259 342 ntBASIC1.74□□□□□ -2.13
ClockO08785 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.74□□□□□ -2.13
ClockO08785 Gm16328-201ENSMUST00000126985 196 ntBASIC1.74□□□□□ -2.13
ClockO08785 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.74□□□□□ -2.13
ClockO08785 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
ClockO08785 Gm23829-201ENSMUST00000157392 270 ntBASIC1.74□□□□□ -2.13
ClockO08785 Gm16584-201ENSMUST00000159267 189 ntBASIC1.74□□□□□ -2.13
ClockO08785 Mir7068-201ENSMUST00000183439 74 ntBASIC1.74□□□□□ -2.13
ClockO08785 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.74□□□□□ -2.13
ClockO08785 Gm29950-201ENSMUST00000195273 237 ntBASIC1.74□□□□□ -2.13
ClockO08785 Gm43431-201ENSMUST00000198577 340 ntBASIC1.74□□□□□ -2.13
ClockO08785 Gm17906-201ENSMUST00000202480 901 ntBASIC1.74□□□□□ -2.13
ClockO08785 Gm45071-201ENSMUST00000205353 571 ntBASIC1.74□□□□□ -2.13
ClockO08785 Gm44923-201ENSMUST00000206673 85 ntBASIC1.74□□□□□ -2.13
ClockO08785 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms