Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC122465.3-201ENSMUST00000221644 355 ntBASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 CT030166.1-201ENSMUST00000222654 357 ntBASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Gm15037-201ENSMUST00000120358 259 ntBASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Mir3066-201ENSMUST00000175296 83 ntBASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Gm45146-201ENSMUST00000207108 221 ntBASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.29□□□□□ -2.36
Ccdc180J3QNE4 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.29□□□□□ -2.36
Ccdc180J3QNE4 Mir3086-201ENSMUST00000175072 87 ntBASIC0.29□□□□□ -2.36
Ccdc180J3QNE4 Gm37361-201ENSMUST00000194345 132 ntBASIC0.29□□□□□ -2.36
Ccdc180J3QNE4 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0.29□□□□□ -2.36
Ccdc180J3QNE4 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.29□□□□□ -2.36
Ccdc180J3QNE4 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.29□□□□□ -2.36
Ccdc180J3QNE4 Snora41-201ENSMUST00000082668 132 ntBASIC0.29□□□□□ -2.36
Ccdc180J3QNE4 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.28□□□□□ -2.36
Ccdc180J3QNE4 Gm45023-201ENSMUST00000207951 379 ntBASIC0.28□□□□□ -2.36
Ccdc180J3QNE4 Gm45316-201ENSMUST00000210128 162 ntBASIC0.28□□□□□ -2.36
Ccdc180J3QNE4 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC0.28□□□□□ -2.36
Ccdc180J3QNE4 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Ccdc180J3QNE4 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.28□□□□□ -2.37
Ccdc180J3QNE4 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Gm18397-201ENSMUST00000176704 587 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Gm8403-201ENSMUST00000189712 1298 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Trbv24-201ENSMUST00000194614 347 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 AC105958.2-201ENSMUST00000214167 191 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Gm23559-201ENSMUST00000157824 103 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Gm29005-201ENSMUST00000186773 320 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Gm36956-201ENSMUST00000193830 214 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Gm43284-201ENSMUST00000200103 253 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Gm45688-201ENSMUST00000210002 101 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Mir137-201ENSMUST00000083635 73 ntBASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Ccdc180J3QNE4 Gm23836-201ENSMUST00000104434 129 ntBASIC0.26□□□□□ -2.37
Ccdc180J3QNE4 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Ccdc180J3QNE4 Gm14785-201ENSMUST00000120185 539 ntBASIC0.26□□□□□ -2.37
Ccdc180J3QNE4 Gm14360-201ENSMUST00000120670 393 ntBASIC0.26□□□□□ -2.37
Ccdc180J3QNE4 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.26□□□□□ -2.37
Ccdc180J3QNE4 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.26□□□□□ -2.37
Ccdc180J3QNE4 Gm27660-201ENSMUST00000184028 208 ntBASIC0.26□□□□□ -2.37
Ccdc180J3QNE4 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Ccdc180J3QNE4 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Ccdc180J3QNE4 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC0.26□□□□□ -2.37
Ccdc180J3QNE4 Gm7648-201ENSMUST00000173036 1658 ntBASIC0.25□□□□□ -2.37
Ccdc180J3QNE4 Gm25666-201ENSMUST00000157702 107 ntBASIC0.25□□□□□ -2.37
Ccdc180J3QNE4 Gm45313-201ENSMUST00000210584 178 ntBASIC0.25□□□□□ -2.37
Ccdc180J3QNE4 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Gm24018-201ENSMUST00000083232 107 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Gm13678-201ENSMUST00000118926 340 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Gm14577-201ENSMUST00000121134 256 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Gm16458-201ENSMUST00000121428 502 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Gm25333-201ENSMUST00000158035 246 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Gm17052-201ENSMUST00000165496 289 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Gm10074-201ENSMUST00000174543 249 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Mir6364-201ENSMUST00000183396 86 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Gm44654-201ENSMUST00000208052 329 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 AC125531.1-201ENSMUST00000219849 221 ntBASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
Ccdc180J3QNE4 Gm14800-201ENSMUST00000122084 1272 ntBASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm26484-201ENSMUST00000158018 106 ntBASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Mir3057-201ENSMUST00000175040 91 ntBASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm21815-201ENSMUST00000178213 664 ntBASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm28843-201ENSMUST00000189198 678 ntBASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm29546-201ENSMUST00000191171 678 ntBASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm29740-201ENSMUST00000193182 655 ntBASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm34139-201ENSMUST00000196166 294 ntBASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm44345-201ENSMUST00000199560 135 ntBASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Gm24622-201ENSMUST00000082619 162 ntBASIC0.23□□□□□ -2.37
Ccdc180J3QNE4 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
Ccdc180J3QNE4 Gm26338-201ENSMUST00000102372 110 ntBASIC0.22□□□□□ -2.37
Ccdc180J3QNE4 Gm16186-201ENSMUST00000120132 216 ntBASIC0.22□□□□□ -2.37
Ccdc180J3QNE4 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Ccdc180J3QNE4 Gm25423-201ENSMUST00000157609 107 ntBASIC0.22□□□□□ -2.37
Ccdc180J3QNE4 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Ccdc180J3QNE4 Gm42570-201ENSMUST00000195937 292 ntBASIC0.22□□□□□ -2.37
Ccdc180J3QNE4 Gm18645-201ENSMUST00000209593 651 ntBASIC0.22□□□□□ -2.37
Ccdc180J3QNE4 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Ccdc180J3QNE4 Gm26074-201ENSMUST00000104063 129 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms