Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Gm25269-201ENSMUST00000122601 104 ntBASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Gm27396-201ENSMUST00000157708 58 ntBASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Gm22118-201ENSMUST00000175593 171 ntBASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Gm6625-201ENSMUST00000177870 272 ntBASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Mir6336-201ENSMUST00000183581 130 ntBASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Gm8296-201ENSMUST00000185597 524 ntBASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Gm29064-201ENSMUST00000187014 813 ntBASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Gm37089-201ENSMUST00000195616 129 ntBASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Gm18015-201ENSMUST00000214879 316 ntBASIC3.6□□□□□ -1.83
Trim55G3X8Y1 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.6□□□□□ -1.83
Trim55G3X8Y1 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Gm23443-201ENSMUST00000082916 128 ntBASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim55G3X8Y1 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Mir881-201ENSMUST00000104844 78 ntBASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Mir1198-201ENSMUST00000116995 121 ntBASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Gm11460-201ENSMUST00000118200 361 ntBASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Gm15268-201ENSMUST00000118845 352 ntBASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Gm22986-201ENSMUST00000122753 130 ntBASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Gm20693-201ENSMUST00000177431 211 ntBASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trim55G3X8Y1 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.59□□□□□ -1.83
Trim55G3X8Y1 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Gm24626-201ENSMUST00000082621 161 ntBASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Gm22294-201ENSMUST00000083308 104 ntBASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Mir370-201ENSMUST00000083499 79 ntBASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.59□□□□□ -1.83
Trim55G3X8Y1 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim55G3X8Y1 AC164297.1-201ENSMUST00000224484 1561 ntBASIC3.59□□□□□ -1.84
Trim55G3X8Y1 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Trim55G3X8Y1 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Gm25169-201ENSMUST00000104190 129 ntBASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Mdga2-203ENSMUST00000113942 423 ntBASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Gm12252-201ENSMUST00000119517 219 ntBASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Gm22315-201ENSMUST00000158010 143 ntBASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Gm24503-201ENSMUST00000158454 135 ntBASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Gm24056-201ENSMUST00000158617 146 ntBASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Gm20660-201ENSMUST00000177515 289 ntBASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Gm27545-201ENSMUST00000184755 202 ntBASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Gm45879-201ENSMUST00000212521 392 ntBASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trim55G3X8Y1 Gm24116-201ENSMUST00000103975 107 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm24792-201ENSMUST00000104286 128 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Mir1193-201ENSMUST00000116761 121 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm13714-201ENSMUST00000117313 221 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm13432-201ENSMUST00000118861 241 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm14782-201ENSMUST00000120151 195 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm14402-201ENSMUST00000122217 508 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm25104-201ENSMUST00000122476 163 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm23098-201ENSMUST00000157552 299 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm22316-201ENSMUST00000158012 216 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm25749-201ENSMUST00000175485 111 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm20630-201ENSMUST00000177387 551 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm29104-201ENSMUST00000186304 222 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm18433-202ENSMUST00000195682 196 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Mir129b-201ENSMUST00000197461 65 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.57□□□□□ -1.84
Trim55G3X8Y1 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim55G3X8Y1 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Gm25592-201ENSMUST00000082635 131 ntBASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
Trim55G3X8Y1 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim55G3X8Y1 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Trim55G3X8Y1 Gm24423-201ENSMUST00000101982 106 ntBASIC3.56□□□□□ -1.84
Trim55G3X8Y1 Gm24079-201ENSMUST00000104352 132 ntBASIC3.56□□□□□ -1.84
Trim55G3X8Y1 Gm24640-201ENSMUST00000116949 126 ntBASIC3.56□□□□□ -1.84
Trim55G3X8Y1 Gm22626-201ENSMUST00000116990 126 ntBASIC3.56□□□□□ -1.84
Trim55G3X8Y1 Gm14971-201ENSMUST00000117980 663 ntBASIC3.56□□□□□ -1.84
Trim55G3X8Y1 Gm13567-201ENSMUST00000118026 247 ntBASIC3.56□□□□□ -1.84
Trim55G3X8Y1 Gm12042-201ENSMUST00000120479 301 ntBASIC3.56□□□□□ -1.84
Trim55G3X8Y1 Gm13992-201ENSMUST00000120558 156 ntBASIC3.56□□□□□ -1.84
Trim55G3X8Y1 Gm11645-201ENSMUST00000121589 649 ntBASIC3.56□□□□□ -1.84
Trim55G3X8Y1 Gm25543-201ENSMUST00000122678 312 ntBASIC3.56□□□□□ -1.84
Trim55G3X8Y1 Gm25805-201ENSMUST00000122788 108 ntBASIC3.56□□□□□ -1.84
Trim55G3X8Y1 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms