Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Chd3B1AR17 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm23126-201ENSMUST00000104260 134 ntBASIC1.37□□□□□ -2.19
Chd3B1AR17 Gm11219-201ENSMUST00000118565 358 ntBASIC1.37□□□□□ -2.19
Chd3B1AR17 Gm15211-201ENSMUST00000118932 528 ntBASIC1.37□□□□□ -2.19
Chd3B1AR17 Gm26275-201ENSMUST00000157101 268 ntBASIC1.37□□□□□ -2.19
Chd3B1AR17 Gm24262-201ENSMUST00000157431 144 ntBASIC1.37□□□□□ -2.19
Chd3B1AR17 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.37□□□□□ -2.19
Chd3B1AR17 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.37□□□□□ -2.19
Chd3B1AR17 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Chd3B1AR17 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Chd3B1AR17 Gm44041-201ENSMUST00000203678 396 ntBASIC1.37□□□□□ -2.19
Chd3B1AR17 Gm44459-201ENSMUST00000203926 160 ntBASIC1.37□□□□□ -2.19
Chd3B1AR17 AC152951.1-201ENSMUST00000218907 266 ntBASIC1.37□□□□□ -2.19
Chd3B1AR17 AC158388.1-201ENSMUST00000225441 256 ntBASIC1.37□□□□□ -2.19
Chd3B1AR17 Gm24406-201ENSMUST00000083026 128 ntBASIC1.37□□□□□ -2.19
Chd3B1AR17 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.37□□□□□ -2.19
Chd3B1AR17 Gm14594-201ENSMUST00000118052 537 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm14590-201ENSMUST00000118934 537 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm11359-201ENSMUST00000120039 567 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm25220-201ENSMUST00000157546 95 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm22339-201ENSMUST00000157718 62 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm24056-201ENSMUST00000158617 146 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm14596-201ENSMUST00000180268 537 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm14595-201ENSMUST00000180335 537 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm29603-201ENSMUST00000186792 334 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm44483-201ENSMUST00000197203 97 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm45268-201ENSMUST00000210046 370 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm46994-201ENSMUST00000221523 219 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm5955-201ENSMUST00000222712 219 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm24805-201ENSMUST00000082931 104 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm13903-201ENSMUST00000120945 193 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm2768-201ENSMUST00000121062 250 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm25312-201ENSMUST00000178972 107 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm29550-201ENSMUST00000185543 285 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm44384-201ENSMUST00000200208 114 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm29754-201ENSMUST00000206269 358 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm8940-201ENSMUST00000212585 219 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.36□□□□□ -2.19
Chd3B1AR17 Mir196b-201ENSMUST00000083509 85 ntBASIC1.36□□□□□ -2.19
Chd3B1AR17 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Chd3B1AR17 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm25901-201ENSMUST00000158494 130 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm23180-201ENSMUST00000158686 125 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.35□□□□□ -2.19
Chd3B1AR17 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm43493-201ENSMUST00000199837 202 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm18691-201ENSMUST00000203593 872 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm19709-201ENSMUST00000215403 482 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC1.35□□□□□ -2.19
Chd3B1AR17 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm26126-201ENSMUST00000083188 164 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm24610-201ENSMUST00000083270 109 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Mir151-201ENSMUST00000083678 68 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm22496-201ENSMUST00000104493 88 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm14989-201ENSMUST00000120497 207 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm23893-201ENSMUST00000158106 134 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm24772-201ENSMUST00000158507 110 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm25994-201ENSMUST00000175392 101 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm24111-201ENSMUST00000175491 97 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm21737-201ENSMUST00000178112 664 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm25175-201ENSMUST00000178712 79 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm21729-201ENSMUST00000180058 664 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm21853-201ENSMUST00000180071 664 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm20901-201ENSMUST00000180177 664 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Mir7663-201ENSMUST00000183950 61 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm29073-201ENSMUST00000185563 664 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm28666-201ENSMUST00000186649 274 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm29495-201ENSMUST00000189319 664 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm28090-201ENSMUST00000189458 664 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm21647-201ENSMUST00000189755 664 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm29165-201ENSMUST00000190655 664 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm29211-201ENSMUST00000191470 664 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm36891-201ENSMUST00000191995 655 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Chd3B1AR17 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm44182-201ENSMUST00000204052 115 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm24622-201ENSMUST00000082619 162 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.35□□□□□ -2.19
Chd3B1AR17 Gm22780-201ENSMUST00000104084 132 ntBASIC1.34□□□□□ -2.19
Chd3B1AR17 Gm6664-201ENSMUST00000119138 468 ntBASIC1.34□□□□□ -2.19
Chd3B1AR17 Gm14915-201ENSMUST00000120747 204 ntBASIC1.34□□□□□ -2.19
Chd3B1AR17 Gm22611-201ENSMUST00000158288 150 ntBASIC1.34□□□□□ -2.19
Chd3B1AR17 Gm23008-201ENSMUST00000158946 80 ntBASIC1.34□□□□□ -2.19
Chd3B1AR17 Gm25633-201ENSMUST00000178565 107 ntBASIC1.34□□□□□ -2.19
Chd3B1AR17 Gm22862-201ENSMUST00000178593 121 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms