Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Mir6345-201ENSMUST00000184286 128 ntBASIC3.73□□□□□ -1.81
Ccdc9bA3KGF9 Gm27869-201ENSMUST00000184327 122 ntBASIC3.73□□□□□ -1.81
Ccdc9bA3KGF9 Gm19620-201ENSMUST00000195972 434 ntBASIC3.73□□□□□ -1.81
Ccdc9bA3KGF9 Gm45031-201ENSMUST00000206800 288 ntBASIC3.73□□□□□ -1.81
Ccdc9bA3KGF9 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc9bA3KGF9 Gm22868-201ENSMUST00000083955 164 ntBASIC3.73□□□□□ -1.81
Ccdc9bA3KGF9 Gm24163-201ENSMUST00000093660 132 ntBASIC3.73□□□□□ -1.81
Ccdc9bA3KGF9 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc9bA3KGF9 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc9bA3KGF9 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Gm24127-201ENSMUST00000104110 130 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Gm24605-201ENSMUST00000104772 96 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Gm7123-201ENSMUST00000117647 213 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Gm25321-201ENSMUST00000122558 102 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Gm23536-201ENSMUST00000157541 134 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Gm25424-201ENSMUST00000157612 58 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Gm24053-201ENSMUST00000158620 105 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Gm28267-201ENSMUST00000191093 265 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Gm45796-201ENSMUST00000212483 114 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Gm22443-201ENSMUST00000082890 107 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc9bA3KGF9 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Ccdc9bA3KGF9 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Ccdc9bA3KGF9 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Gm23271-201ENSMUST00000104052 124 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Gm25727-201ENSMUST00000104522 131 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Gm13167-201ENSMUST00000118554 578 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Gm12897-201ENSMUST00000120341 250 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Gm8200-201ENSMUST00000122390 222 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Gm23391-201ENSMUST00000157579 104 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Gm24056-201ENSMUST00000158617 146 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Gm23702-201ENSMUST00000158840 130 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Gm37104-201ENSMUST00000193278 196 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Gm42526-201ENSMUST00000198956 393 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Gm45687-201ENSMUST00000209454 155 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ccdc9bA3KGF9 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Gm24281-201ENSMUST00000104234 136 ntBASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Gm14916-201ENSMUST00000121904 204 ntBASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Gm25985-201ENSMUST00000122677 107 ntBASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Gm25716-201ENSMUST00000158628 104 ntBASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Gm10357-201ENSMUST00000159886 264 ntBASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Gm44032-201ENSMUST00000204841 166 ntBASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc9bA3KGF9 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Gm24582-201ENSMUST00000103967 103 ntBASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Gm25168-201ENSMUST00000104189 132 ntBASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Gm27396-201ENSMUST00000157708 58 ntBASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Gm43853-201ENSMUST00000197162 301 ntBASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Gm10813-201ENSMUST00000099936 90 ntBASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc9bA3KGF9 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms