Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.65□□□□□ -2.15
Scn3aA2ASI5 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Scn3aA2ASI5 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm22386-201ENSMUST00000158192 129 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm23933-201ENSMUST00000178405 79 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm28299-201ENSMUST00000189908 339 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Trbv6-201ENSMUST00000193743 276 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm26147-201ENSMUST00000104479 114 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm15175-201ENSMUST00000117629 132 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm23956-201ENSMUST00000157211 119 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm22038-201ENSMUST00000157277 242 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm23083-201ENSMUST00000157851 116 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm23317-201ENSMUST00000157999 129 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm22733-201ENSMUST00000158094 91 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Scn3aA2ASI5 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm27028-201ENSMUST00000182303 399 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm27245-201ENSMUST00000184385 376 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Gm28825-201ENSMUST00000186233 238 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.64□□□□□ -2.15
Scn3aA2ASI5 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Scn3aA2ASI5 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Gm12006-201ENSMUST00000120786 403 ntBASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Gm12045-201ENSMUST00000122122 573 ntBASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Gm13368-201ENSMUST00000122443 430 ntBASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Gm26105-201ENSMUST00000157253 190 ntBASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Gm21885-201ENSMUST00000178891 327 ntBASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Gm27919-201ENSMUST00000185163 107 ntBASIC1.63□□□□□ -2.15
Scn3aA2ASI5 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Gm43556-201ENSMUST00000196186 681 ntBASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Gm44990-201ENSMUST00000203922 217 ntBASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.63□□□□□ -2.15
Scn3aA2ASI5 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.63□□□□□ -2.15
Scn3aA2ASI5 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Gm26327-201ENSMUST00000093724 111 ntBASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Scn3aA2ASI5 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm13806-201ENSMUST00000117822 325 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm15029-201ENSMUST00000119742 199 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm12872-201ENSMUST00000121835 320 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm26275-201ENSMUST00000157101 268 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm25361-201ENSMUST00000179358 76 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Mir7665-201ENSMUST00000184907 63 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm29640-201ENSMUST00000187972 278 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm37119-201ENSMUST00000195691 389 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm32300-201ENSMUST00000221735 515 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm26082-201ENSMUST00000104070 127 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm13355-201ENSMUST00000117996 317 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm14887-201ENSMUST00000119522 663 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm24393-201ENSMUST00000158135 97 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm22389-201ENSMUST00000158193 301 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm5277-201ENSMUST00000164923 556 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Mir3964-201ENSMUST00000174898 74 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Trbv24-201ENSMUST00000194614 347 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Gm23517-201ENSMUST00000082830 192 ntBASIC1.62□□□□□ -2.15
Scn3aA2ASI5 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Mir190b-201ENSMUST00000104803 80 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Gm12550-201ENSMUST00000118478 329 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Gm13804-201ENSMUST00000119552 172 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Gm14366-201ENSMUST00000121970 730 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Gm23558-201ENSMUST00000157823 80 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Gm23196-201ENSMUST00000158806 107 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Gm15914-201ENSMUST00000161922 309 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Gm24264-201ENSMUST00000179835 94 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Gm37599-201ENSMUST00000193067 489 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 Gm18774-201ENSMUST00000218269 601 ntBASIC1.61□□□□□ -2.15
Scn3aA2ASI5 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 186.1 ms