Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm45456-201ENSMUST00000210841 243 ntBASIC0.73□□□□□ -2.29
Trav9-4A0A0B4J1K2 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.73□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm25257-201ENSMUST00000083907 110 ntBASIC0.73□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm5670-201ENSMUST00000093546 372 ntBASIC0.73□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.73□□□□□ -2.29
Trav9-4A0A0B4J1K2 AC133934.2-201ENSMUST00000221729 4129 ntBASIC0.73□□□□□ -2.29
Trav9-4A0A0B4J1K2 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm26082-201ENSMUST00000104070 127 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm24079-201ENSMUST00000104352 132 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm13885-201ENSMUST00000117569 187 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm14215-201ENSMUST00000120578 221 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm24840-201ENSMUST00000122603 147 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm16129-201ENSMUST00000152628 486 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm23170-201ENSMUST00000157158 106 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm23328-201ENSMUST00000157418 132 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm6660-201ENSMUST00000179149 468 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm9022-202ENSMUST00000183285 483 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Mir6380-201ENSMUST00000184334 81 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm29167-201ENSMUST00000190024 377 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm19441-201ENSMUST00000221545 330 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 AC151902.1-201ENSMUST00000227800 375 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm24624-201ENSMUST00000082617 164 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Olfr575-201ENSMUST00000084812 957 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Trav9-4A0A0B4J1K2 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm11606-201ENSMUST00000120706 617 ntBASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm11575-201ENSMUST00000122243 228 ntBASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm8121-201ENSMUST00000153583 499 ntBASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm26487-201ENSMUST00000158022 94 ntBASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm26213-201ENSMUST00000158582 110 ntBASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm22392-201ENSMUST00000177971 107 ntBASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm27517-201ENSMUST00000184347 236 ntBASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Mir7052-201ENSMUST00000184821 65 ntBASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm43199-201ENSMUST00000200019 307 ntBASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm22299-201ENSMUST00000082663 136 ntBASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Trav9-4A0A0B4J1K2 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm24419-201ENSMUST00000157875 332 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm24885-201ENSMUST00000158783 270 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm25243-201ENSMUST00000174912 207 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm16399-201ENSMUST00000181423 219 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm29288-201ENSMUST00000191582 901 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Mir3068-202ENSMUST00000197755 79 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm44564-201ENSMUST00000207985 180 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm44654-201ENSMUST00000208052 329 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm30738-201ENSMUST00000221346 502 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm26328-201ENSMUST00000082821 107 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm23377-201ENSMUST00000082943 126 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm26265-201ENSMUST00000083277 135 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm25794-201ENSMUST00000083286 107 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm22974-201ENSMUST00000083301 103 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm23452-201ENSMUST00000083327 107 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Mir429-201ENSMUST00000083493 83 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Mir196b-201ENSMUST00000083509 85 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm26166-201ENSMUST00000083788 107 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm26175-201ENSMUST00000083794 131 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm381-201ENSMUST00000117443 2037 ntBASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm22678-201ENSMUST00000116974 101 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm14879-201ENSMUST00000117308 507 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm11813-201ENSMUST00000118586 291 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm12825-201ENSMUST00000120249 563 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm14600-201ENSMUST00000121032 630 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm15309-201ENSMUST00000121644 240 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm14402-201ENSMUST00000122217 508 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm6182-201ENSMUST00000156439 1208 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm23983-201ENSMUST00000157142 114 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm22731-201ENSMUST00000158086 94 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Mir3968-201ENSMUST00000175355 100 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm27894-201ENSMUST00000184177 92 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Mir6419-201ENSMUST00000184784 113 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm43652-201ENSMUST00000196219 675 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm45366-201ENSMUST00000209828 384 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm18188-201ENSMUST00000219386 478 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm25079-201ENSMUST00000082529 203 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Mir27b-201ENSMUST00000083541 73 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm25683-201ENSMUST00000083940 131 ntBASIC0.69□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm23202-201ENSMUST00000104376 129 ntBASIC0.68□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm22496-201ENSMUST00000104493 88 ntBASIC0.68□□□□□ -2.3
Trav9-4A0A0B4J1K2 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.68□□□□□ -2.3
Trav9-4A0A0B4J1K2 Gm2003-201ENSMUST00000118537 636 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms