Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.33□□□□□ -2.2
Trav11A0A0B4J1J9 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.33□□□□□ -2.2
Trav11A0A0B4J1J9 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.33□□□□□ -2.2
Trav11A0A0B4J1J9 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trav11A0A0B4J1J9 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.33□□□□□ -2.2
Trav11A0A0B4J1J9 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trav11A0A0B4J1J9 Gm26015-201ENSMUST00000104402 125 ntBASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Gm23983-201ENSMUST00000157142 114 ntBASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Gm25115-201ENSMUST00000157187 140 ntBASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Gm22217-201ENSMUST00000157556 313 ntBASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Gm24419-201ENSMUST00000157875 332 ntBASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Gm28474-201ENSMUST00000188501 315 ntBASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Gm29657-201ENSMUST00000189807 342 ntBASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Gm44990-201ENSMUST00000203922 217 ntBASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Gm10360-201ENSMUST00000097219 272 ntBASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Trav11A0A0B4J1J9 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Gm25090-201ENSMUST00000104000 132 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Gm9043-201ENSMUST00000119677 314 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Gm13581-201ENSMUST00000120675 278 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Gm22338-201ENSMUST00000157715 129 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Gm25051-201ENSMUST00000158602 249 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Gm9593-201ENSMUST00000166034 469 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Gm9892-201ENSMUST00000182415 992 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Mir6993-201ENSMUST00000184912 65 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Gm44384-201ENSMUST00000200208 114 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Gm44256-201ENSMUST00000203304 335 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Gm22299-201ENSMUST00000082663 136 ntBASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
Trav11A0A0B4J1J9 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm25094-201ENSMUST00000103992 131 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm14624-201ENSMUST00000117746 192 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm12370-201ENSMUST00000117809 604 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm15719-201ENSMUST00000120619 635 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm22843-201ENSMUST00000157710 134 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm22768-201ENSMUST00000158366 153 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm24222-201ENSMUST00000158834 93 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm20656-201ENSMUST00000176925 518 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm24518-201ENSMUST00000180275 94 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm7837-201ENSMUST00000190873 412 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Mir7021-201ENSMUST00000197026 63 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Mir3961-201ENSMUST00000198795 59 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm42960-201ENSMUST00000202160 241 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm45252-201ENSMUST00000211579 397 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Mir222-201ENSMUST00000083537 79 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Gm24817-201ENSMUST00000093672 105 ntBASIC1.3□□□□□ -2.2
Trav11A0A0B4J1J9 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm12639-201ENSMUST00000121400 493 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm14402-201ENSMUST00000122217 508 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm26345-201ENSMUST00000157534 120 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm26214-201ENSMUST00000158581 107 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm25162-201ENSMUST00000158906 159 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm22500-201ENSMUST00000158982 99 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Mir6355-201ENSMUST00000183687 106 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Mir7241-201ENSMUST00000184532 64 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm27544-201ENSMUST00000185069 155 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm43083-201ENSMUST00000199594 476 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm42578-201ENSMUST00000199960 194 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm2829-201ENSMUST00000213121 499 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm32300-201ENSMUST00000221735 515 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm26228-201ENSMUST00000082512 107 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm25080-201ENSMUST00000082526 107 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm23462-201ENSMUST00000083264 104 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Mir429-201ENSMUST00000083493 83 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm25518-201ENSMUST00000083864 107 ntBASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trav11A0A0B4J1J9 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms