Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Gm13603-201ENSMUST00000119404 83 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Gm12304-201ENSMUST00000120312 385 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Gm15878-201ENSMUST00000127561 306 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Gm26414-201ENSMUST00000157674 269 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Gm44564-201ENSMUST00000207985 180 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Gm18854-201ENSMUST00000211196 329 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Gm19441-201ENSMUST00000221545 330 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 AL645546.2-201ENSMUST00000224526 265 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 AC158521.1-201ENSMUST00000225295 660 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 AC154692.1-201ENSMUST00000228314 544 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Mir429-201ENSMUST00000083493 83 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Gm23042-201ENSMUST00000083866 101 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm23705-201ENSMUST00000104370 130 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Mir883a-201ENSMUST00000104824 76 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm11606-201ENSMUST00000120706 617 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm15309-201ENSMUST00000121644 240 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm23170-201ENSMUST00000157158 106 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm24419-201ENSMUST00000157875 332 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm22731-201ENSMUST00000158086 94 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm26213-201ENSMUST00000158582 110 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm27587-201ENSMUST00000185116 163 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm38323-201ENSMUST00000192450 210 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm9236-201ENSMUST00000196892 587 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm45101-201ENSMUST00000208327 232 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm19709-201ENSMUST00000215403 482 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 AC167977.2-201ENSMUST00000225676 682 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm23735-201ENSMUST00000082551 134 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Gm25403-201ENSMUST00000082971 143 ntBASIC0.64□□□□□ -2.31
Trav4-2A0A075B638 Mir301b-201ENSMUST00000102333 97 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm25213-201ENSMUST00000102388 113 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm25168-201ENSMUST00000104189 132 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm25376-201ENSMUST00000104340 133 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm14879-201ENSMUST00000117308 507 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm23983-201ENSMUST00000157142 114 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm21754-201ENSMUST00000177550 479 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm16399-201ENSMUST00000181423 219 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm27676-201ENSMUST00000183669 61 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Mir7675-201ENSMUST00000184262 58 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Mir7017-201ENSMUST00000184894 62 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm18356-201ENSMUST00000185677 623 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm43427-201ENSMUST00000198188 331 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm44654-201ENSMUST00000208052 329 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 AC123062.1-201ENSMUST00000221287 481 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 AC124569.1-201ENSMUST00000225932 101 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm23517-201ENSMUST00000082830 192 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm23645-201ENSMUST00000083228 108 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm23454-201ENSMUST00000083332 133 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm23733-201ENSMUST00000083750 106 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm23741-201ENSMUST00000097237 171 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm381-201ENSMUST00000117443 2037 ntBASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Trav4-2A0A075B638 Gm25832-201ENSMUST00000104140 130 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm26143-201ENSMUST00000104480 108 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm12370-201ENSMUST00000117809 604 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm14359-201ENSMUST00000118883 424 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm15861-201ENSMUST00000120979 339 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm15274-201ENSMUST00000131442 291 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm21979-201ENSMUST00000139887 291 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm9498-201ENSMUST00000140849 291 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm14368-201ENSMUST00000145305 415 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm15259-201ENSMUST00000151262 291 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm15279-201ENSMUST00000155593 288 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm25454-201ENSMUST00000157947 315 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm24020-201ENSMUST00000180156 108 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm19123-201ENSMUST00000190716 651 ntBASIC0.62□□□□□ -2.31
Trav4-2A0A075B638 Gm44482-201ENSMUST00000199232 103 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms