Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm23472-201ENSMUST00000101806 191 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm23987-201ENSMUST00000117039 129 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm23000-201ENSMUST00000157083 139 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm22500-201ENSMUST00000158982 99 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm24497-201ENSMUST00000177868 191 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm25939-201ENSMUST00000179876 191 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm38238-201ENSMUST00000194334 346 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm42647-201ENSMUST00000195939 459 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Mir6925-201ENSMUST00000197857 70 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Mir7232-201ENSMUST00000197929 74 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Mir691-201ENSMUST00000199719 78 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm6796-201ENSMUST00000211919 243 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm10264-201ENSMUST00000220589 429 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 AC154245.1-201ENSMUST00000224615 601 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm23444-201ENSMUST00000082922 191 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Mir127-201ENSMUST00000093568 70 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.23□□□□□ -2.05
H2afb2S4R1M3 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm24274-201ENSMUST00000116787 124 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm11460-201ENSMUST00000118200 361 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm14593-201ENSMUST00000119948 294 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm11834-201ENSMUST00000122257 585 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm26278-201ENSMUST00000157098 132 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm24997-201ENSMUST00000157910 105 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm22257-201ENSMUST00000158687 301 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm26180-201ENSMUST00000179942 107 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm23190-201ENSMUST00000180307 64 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Mir6371-201ENSMUST00000184470 111 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm7329-201ENSMUST00000185915 210 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm43578-201ENSMUST00000201250 459 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm45730-201ENSMUST00000212560 395 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm19326-201ENSMUST00000219818 326 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
H2afb2S4R1M3 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Gm11065-201ENSMUST00000111462 228 ntBASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Gm22032-201ENSMUST00000116946 116 ntBASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Gm16510-201ENSMUST00000153501 249 ntBASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Gm23559-201ENSMUST00000157824 103 ntBASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Gm24192-201ENSMUST00000157978 145 ntBASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Gm25434-201ENSMUST00000158278 167 ntBASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.21□□□□□ -2.06
H2afb2S4R1M3 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Gm44083-201ENSMUST00000203114 337 ntBASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.21□□□□□ -2.06
H2afb2S4R1M3 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.21□□□□□ -2.06
H2afb2S4R1M3 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.21□□□□□ -2.06
H2afb2S4R1M3 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
H2afb2S4R1M3 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Mir669d-2-201ENSMUST00000116854 86 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm14020-201ENSMUST00000118165 662 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm11556-201ENSMUST00000120751 288 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm24596-201ENSMUST00000122504 107 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm23435-201ENSMUST00000157183 156 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm23137-201ENSMUST00000157559 107 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm25909-201ENSMUST00000157619 121 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm24584-201ENSMUST00000157972 107 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm24853-201ENSMUST00000158026 121 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm25863-201ENSMUST00000158249 329 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm24499-201ENSMUST00000158446 104 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm25211-201ENSMUST00000177553 107 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm24540-201ENSMUST00000177627 107 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm25256-201ENSMUST00000177746 107 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm22822-201ENSMUST00000177941 107 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Rnu6-201ENSMUST00000178023 107 ntBASIC2.2□□□□□ -2.06
H2afb2S4R1M3 Gm23151-201ENSMUST00000178061 107 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 131.5 ms