Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Gm14473-201ENSMUST00000122269 557 ntBASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Mir6414-201ENSMUST00000183685 82 ntBASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Gm44354-201ENSMUST00000196017 143 ntBASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 AC155167.3-201ENSMUST00000226349 217 ntBASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Gm23727-201ENSMUST00000083352 164 ntBASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Mir137-201ENSMUST00000083635 73 ntBASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Gm26327-201ENSMUST00000093724 111 ntBASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Prpf40aQ9R1C7 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Prpf40aQ9R1C7 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.4□□□□□ -1.7
Prpf40aQ9R1C7 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Gm22493-201ENSMUST00000104494 132 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Gm11460-201ENSMUST00000118200 361 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Gm15183-201ENSMUST00000118933 348 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Gm25321-201ENSMUST00000122558 102 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Gm22560-201ENSMUST00000157332 120 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Gm25386-201ENSMUST00000157814 288 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Gm24961-201ENSMUST00000157918 184 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Mir6938-201ENSMUST00000184173 63 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Mir6933-201ENSMUST00000184982 81 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Gm45031-201ENSMUST00000206800 288 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 AC167669.4-201ENSMUST00000225967 140 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Gm24163-201ENSMUST00000093660 132 ntBASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
Prpf40aQ9R1C7 Gm37788-201ENSMUST00000193958 2705 ntBASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Gm24605-201ENSMUST00000104772 96 ntBASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Gm23492-201ENSMUST00000116837 115 ntBASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Gm15180-201ENSMUST00000117745 492 ntBASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Mir6370-201ENSMUST00000183510 120 ntBASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Gm36964-201ENSMUST00000191876 198 ntBASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Gm8790-201ENSMUST00000194108 322 ntBASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Gm19620-201ENSMUST00000195972 434 ntBASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Gm45687-201ENSMUST00000209454 155 ntBASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 CT030159.4-201ENSMUST00000221966 395 ntBASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Prpf40aQ9R1C7 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Prpf40aQ9R1C7 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Prpf40aQ9R1C7 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
Prpf40aQ9R1C7 Gm7618-201ENSMUST00000121643 171 ntBASIC4.38□□□□□ -1.71
Prpf40aQ9R1C7 Gm23536-201ENSMUST00000157541 134 ntBASIC4.38□□□□□ -1.71
Prpf40aQ9R1C7 Gm25424-201ENSMUST00000157612 58 ntBASIC4.38□□□□□ -1.71
Prpf40aQ9R1C7 Gm21960-201ENSMUST00000181924 452 ntBASIC4.38□□□□□ -1.71
Prpf40aQ9R1C7 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.38□□□□□ -1.71
Prpf40aQ9R1C7 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.38□□□□□ -1.71
Prpf40aQ9R1C7 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Prpf40aQ9R1C7 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Prpf40aQ9R1C7 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Prpf40aQ9R1C7 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Gm12252-201ENSMUST00000119517 219 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Gm25985-201ENSMUST00000122677 107 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Gm23589-201ENSMUST00000157660 105 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Gm24850-201ENSMUST00000158029 119 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Gm22521-201ENSMUST00000158272 134 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Gm24053-201ENSMUST00000158620 105 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Gm27869-201ENSMUST00000184327 122 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Gm43853-201ENSMUST00000197162 301 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Gm42526-201ENSMUST00000198956 393 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Gm22443-201ENSMUST00000082890 107 ntBASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
Prpf40aQ9R1C7 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms