Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm28408-201ENSMUST00000191557 463 ntBASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 AC154296.1-201ENSMUST00000198150 67 ntBASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm44211-201ENSMUST00000204867 145 ntBASIC0.5□□□□□ -2.33
Scn11aQ9R053 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm25560-201ENSMUST00000104606 176 ntBASIC0.49□□□□□ -2.33
Scn11aQ9R053 Gm13359-201ENSMUST00000119000 695 ntBASIC0.49□□□□□ -2.33
Scn11aQ9R053 Gm14761-201ENSMUST00000121363 262 ntBASIC0.49□□□□□ -2.33
Scn11aQ9R053 Gm23036-201ENSMUST00000157885 99 ntBASIC0.49□□□□□ -2.33
Scn11aQ9R053 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC0.49□□□□□ -2.33
Scn11aQ9R053 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Scn11aQ9R053 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Scn11aQ9R053 Gm27640-201ENSMUST00000184580 147 ntBASIC0.49□□□□□ -2.33
Scn11aQ9R053 Gm29647-201ENSMUST00000188795 666 ntBASIC0.49□□□□□ -2.33
Scn11aQ9R053 Gm28504-201ENSMUST00000190977 666 ntBASIC0.49□□□□□ -2.33
Scn11aQ9R053 AC161758.1-201ENSMUST00000226123 310 ntBASIC0.49□□□□□ -2.33
Scn11aQ9R053 AC157772.2-201ENSMUST00000228202 259 ntBASIC0.49□□□□□ -2.33
Scn11aQ9R053 Mir216a-201ENSMUST00000083605 72 ntBASIC0.49□□□□□ -2.33
Scn11aQ9R053 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC0.48□□□□□ -2.33
Scn11aQ9R053 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.48□□□□□ -2.33
Scn11aQ9R053 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.48□□□□□ -2.33
Scn11aQ9R053 Gm4732-201ENSMUST00000118778 473 ntBASIC0.48□□□□□ -2.33
Scn11aQ9R053 Gm25108-201ENSMUST00000122473 78 ntBASIC0.48□□□□□ -2.33
Scn11aQ9R053 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.48□□□□□ -2.33
Scn11aQ9R053 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Scn11aQ9R053 Gm44403-201ENSMUST00000198554 129 ntBASIC0.48□□□□□ -2.33
Scn11aQ9R053 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.48□□□□□ -2.33
Scn11aQ9R053 AC073947.3-201ENSMUST00000215576 766 ntBASIC0.48□□□□□ -2.33
Scn11aQ9R053 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Scn11aQ9R053 Gm25378-201ENSMUST00000104333 129 ntBASIC0.47□□□□□ -2.33
Scn11aQ9R053 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC0.47□□□□□ -2.33
Scn11aQ9R053 Gm13806-201ENSMUST00000117822 325 ntBASIC0.47□□□□□ -2.33
Scn11aQ9R053 Gm22633-201ENSMUST00000179834 107 ntBASIC0.47□□□□□ -2.33
Scn11aQ9R053 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.47□□□□□ -2.33
Scn11aQ9R053 Gm44465-201ENSMUST00000199536 114 ntBASIC0.47□□□□□ -2.33
Scn11aQ9R053 AC123803.1-201ENSMUST00000216093 189 ntBASIC0.47□□□□□ -2.33
Scn11aQ9R053 AC156952.1-201ENSMUST00000220361 793 ntBASIC0.47□□□□□ -2.33
Scn11aQ9R053 CT030687.1-201ENSMUST00000221854 162 ntBASIC0.47□□□□□ -2.33
Scn11aQ9R053 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Scn11aQ9R053 Gm18406-201ENSMUST00000185872 669 ntBASIC0.47□□□□□ -2.33
Scn11aQ9R053 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC0.47□□□□□ -2.33
Scn11aQ9R053 AC125531.1-201ENSMUST00000219849 221 ntBASIC0.47□□□□□ -2.33
Scn11aQ9R053 Gm19441-201ENSMUST00000221545 330 ntBASIC0.47□□□□□ -2.33
Scn11aQ9R053 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Scn11aQ9R053 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Scn11aQ9R053 n-R5s189-201ENSMUST00000122675 114 ntBASIC0.46□□□□□ -2.34
Scn11aQ9R053 Gm23617-201ENSMUST00000175410 95 ntBASIC0.46□□□□□ -2.34
Scn11aQ9R053 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.46□□□□□ -2.34
Scn11aQ9R053 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Scn11aQ9R053 Mir6915-201ENSMUST00000198839 69 ntBASIC0.46□□□□□ -2.34
Scn11aQ9R053 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.46□□□□□ -2.34
Scn11aQ9R053 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
Scn11aQ9R053 Gm23969-201ENSMUST00000083324 74 ntBASIC0.46□□□□□ -2.34
Scn11aQ9R053 Olfr1160-201ENSMUST00000099839 960 ntBASIC0.46□□□□□ -2.34
Scn11aQ9R053 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.46□□□□□ -2.34
Scn11aQ9R053 Gm16428-201ENSMUST00000121193 723 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Gm25621-201ENSMUST00000157223 114 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Gm17100-201ENSMUST00000168963 272 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Gm18357-201ENSMUST00000188184 580 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Gm43432-201ENSMUST00000196352 121 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Gm43142-201ENSMUST00000198670 361 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Gm18268-201ENSMUST00000208445 943 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
Scn11aQ9R053 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Scn11aQ9R053 Gm22757-201ENSMUST00000102279 96 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
Scn11aQ9R053 Gm13678-201ENSMUST00000118926 340 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Gm12304-201ENSMUST00000120312 385 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Gm6591-201ENSMUST00000121063 434 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Gm13356-201ENSMUST00000121678 335 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Gm36997-201ENSMUST00000195090 707 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Gm44828-201ENSMUST00000203745 106 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 CT030662.3-201ENSMUST00000228751 476 ntBASIC0.45□□□□□ -2.34
Scn11aQ9R053 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC0.44□□□□□ -2.34
Scn11aQ9R053 Gm12889-201ENSMUST00000118684 241 ntBASIC0.44□□□□□ -2.34
Scn11aQ9R053 Gm14364-201ENSMUST00000129209 267 ntBASIC0.44□□□□□ -2.34
Scn11aQ9R053 Gm26152-201ENSMUST00000157427 101 ntBASIC0.44□□□□□ -2.34
Scn11aQ9R053 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.44□□□□□ -2.34
Scn11aQ9R053 Gm22675-201ENSMUST00000158430 104 ntBASIC0.43□□□□□ -2.34
Scn11aQ9R053 Gm25949-201ENSMUST00000175333 114 ntBASIC0.43□□□□□ -2.34
Scn11aQ9R053 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC0.43□□□□□ -2.34
Scn11aQ9R053 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Scn11aQ9R053 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Scn11aQ9R053 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.43□□□□□ -2.34
Scn11aQ9R053 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Scn11aQ9R053 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.42□□□□□ -2.34
Scn11aQ9R053 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 159.8 ms