Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Mir10a-201ENSMUST00000083585 110 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm36944-201ENSMUST00000192257 2759 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Mir223-201ENSMUST00000102112 110 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm22497-201ENSMUST00000104499 131 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm24198-201ENSMUST00000157812 108 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm24885-201ENSMUST00000158783 270 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm24019-201ENSMUST00000178620 107 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm24862-201ENSMUST00000179103 79 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm23310-201ENSMUST00000179105 79 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm26243-201ENSMUST00000179260 107 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm25461-201ENSMUST00000179293 79 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm28404-201ENSMUST00000190242 453 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm43676-201ENSMUST00000197532 540 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm31230-201ENSMUST00000199725 785 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.72□□□□□ -2.13
Trem1Q9JKE2 AC150314.1-201ENSMUST00000214798 238 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Trem1Q9JKE2 AC154527.5-201ENSMUST00000224448 496 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm23296-201ENSMUST00000082555 107 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Gm24859-201ENSMUST00000082729 107 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Trem1Q9JKE2 AC167192.3-201ENSMUST00000224096 1567 ntBASIC1.72□□□□□ -2.13
Trem1Q9JKE2 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
Trem1Q9JKE2 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm25090-201ENSMUST00000104000 132 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm12897-201ENSMUST00000120341 250 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm12372-201ENSMUST00000121654 768 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm14765-201ENSMUST00000121954 326 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm25808-201ENSMUST00000122784 284 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm24691-201ENSMUST00000157762 140 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm25012-201ENSMUST00000158396 164 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Mir6379-201ENSMUST00000183392 115 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Mir7683-201ENSMUST00000183842 61 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm29950-201ENSMUST00000195273 237 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm43431-201ENSMUST00000198577 340 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm17990-201ENSMUST00000211728 553 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.71□□□□□ -2.14
Trem1Q9JKE2 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm26228-201ENSMUST00000082512 107 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm25080-201ENSMUST00000082526 107 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm22299-201ENSMUST00000082663 136 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm23100-201ENSMUST00000083455 141 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm25518-201ENSMUST00000083864 107 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm37143-201ENSMUST00000195180 3259 ntBASIC1.71□□□□□ -2.14
Trem1Q9JKE2 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trem1Q9JKE2 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm14624-201ENSMUST00000117746 192 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm12370-201ENSMUST00000117809 604 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm14638-201ENSMUST00000121338 216 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm14821-201ENSMUST00000121975 435 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm24481-201ENSMUST00000157210 102 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm23829-201ENSMUST00000157392 270 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm25373-201ENSMUST00000158156 115 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm24075-201ENSMUST00000158175 72 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm23342-201ENSMUST00000158958 115 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm9593-201ENSMUST00000166034 469 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm25035-201ENSMUST00000175414 77 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm24656-201ENSMUST00000177548 132 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm24388-201ENSMUST00000177872 107 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm25730-201ENSMUST00000178753 165 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm27369-201ENSMUST00000185182 71 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm37778-201ENSMUST00000191732 190 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm43083-201ENSMUST00000199594 476 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm43578-201ENSMUST00000201250 459 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm7692-201ENSMUST00000213534 409 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Trem1Q9JKE2 Gm24403-201ENSMUST00000104616 130 ntBASIC1.69□□□□□ -2.14
Trem1Q9JKE2 Gm14402-201ENSMUST00000122217 508 ntBASIC1.69□□□□□ -2.14
Trem1Q9JKE2 Gm23889-201ENSMUST00000122689 104 ntBASIC1.69□□□□□ -2.14
Trem1Q9JKE2 Gm23331-201ENSMUST00000157423 108 ntBASIC1.69□□□□□ -2.14
Trem1Q9JKE2 Gm22159-201ENSMUST00000158412 130 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms