Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm20477-201ENSMUST00000174028 280 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Mir3103-201ENSMUST00000175474 67 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Trem3Q9JKE1 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1□□□□□ -2.25
Trem3Q9JKE1 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm29397-201ENSMUST00000185205 333 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm37102-201ENSMUST00000195740 1105 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm43652-201ENSMUST00000196219 675 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm9236-201ENSMUST00000196892 587 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm18774-201ENSMUST00000218269 601 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 CT033785.1-201ENSMUST00000224872 272 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm25799-201ENSMUST00000082643 107 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm22299-201ENSMUST00000082663 136 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Snora3-201ENSMUST00000083082 132 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm25409-201ENSMUST00000083764 131 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm26175-201ENSMUST00000083794 131 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm5670-201ENSMUST00000093546 372 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm16261-201ENSMUST00000096813 205 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1□□□□□ -2.25
Trem3Q9JKE1 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 AC153964.2-201ENSMUST00000217704 2474 ntBASIC0.99□□□□□ -2.25
Trem3Q9JKE1 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Trem3Q9JKE1 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Trem3Q9JKE1 Gm12304-201ENSMUST00000120312 385 ntBASIC0.99□□□□□ -2.25
Trem3Q9JKE1 n-R5s15-201ENSMUST00000122635 111 ntBASIC0.99□□□□□ -2.25
Trem3Q9JKE1 Gm22485-201ENSMUST00000157990 109 ntBASIC0.99□□□□□ -2.25
Trem3Q9JKE1 Mir28b-201ENSMUST00000175399 80 ntBASIC0.99□□□□□ -2.25
Trem3Q9JKE1 Mir7026-201ENSMUST00000184384 67 ntBASIC0.99□□□□□ -2.25
Trem3Q9JKE1 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC0.99□□□□□ -2.25
Trem3Q9JKE1 Gm37579-201ENSMUST00000194291 142 ntBASIC0.99□□□□□ -2.25
Trem3Q9JKE1 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.99□□□□□ -2.25
Trem3Q9JKE1 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Trem3Q9JKE1 Gm45207-201ENSMUST00000207469 145 ntBASIC0.99□□□□□ -2.25
Trem3Q9JKE1 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC0.99□□□□□ -2.25
Trem3Q9JKE1 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Trem3Q9JKE1 CU062626.2-201ENSMUST00000223953 274 ntBASIC0.99□□□□□ -2.25
Trem3Q9JKE1 Mir429-201ENSMUST00000083493 83 ntBASIC0.99□□□□□ -2.25
Trem3Q9JKE1 Mir211-201ENSMUST00000083651 106 ntBASIC0.99□□□□□ -2.25
Trem3Q9JKE1 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Trem3Q9JKE1 Gm15309-201ENSMUST00000121644 240 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 Gm24836-201ENSMUST00000122609 108 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 Mir1942-201ENSMUST00000157274 63 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 Gm25454-201ENSMUST00000157947 315 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 Gm25831-201ENSMUST00000158924 163 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 Gm27942-201ENSMUST00000184669 101 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 Gm18356-201ENSMUST00000185677 623 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.98□□□□□ -2.25
Trem3Q9JKE1 Gm42774-201ENSMUST00000198854 283 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 Gm43232-201ENSMUST00000201346 364 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 AC138401.1-201ENSMUST00000221533 116 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 Gm23517-201ENSMUST00000082830 192 ntBASIC0.98□□□□□ -2.25
Trem3Q9JKE1 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC0.98□□□□□ -2.25
Trem3Q9JKE1 Gm25068-201ENSMUST00000103895 110 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm15177-201ENSMUST00000120491 577 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm16053-201ENSMUST00000120511 188 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm23170-201ENSMUST00000157158 106 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm22099-201ENSMUST00000157925 123 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm25012-201ENSMUST00000158396 164 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm17377-201ENSMUST00000165184 207 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm8114-201ENSMUST00000172225 484 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Mir3057-201ENSMUST00000175040 91 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm25194-201ENSMUST00000177987 79 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm25933-201ENSMUST00000178943 108 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm24137-201ENSMUST00000180055 79 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm23648-201ENSMUST00000180301 107 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm22391-201ENSMUST00000180356 79 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm25820-202ENSMUST00000197479 128 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm43493-201ENSMUST00000199837 202 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm44666-201ENSMUST00000208544 391 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 AC156795.1-201ENSMUST00000214655 414 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm46103-201ENSMUST00000217614 341 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm21937-201ENSMUST00000222825 218 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm22980-201ENSMUST00000082608 70 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm23506-201ENSMUST00000083077 107 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm23454-201ENSMUST00000083332 133 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm8935-202ENSMUST00000105727 1959 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm2869-201ENSMUST00000124359 2621 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.97□□□□□ -2.25
Trem3Q9JKE1 Gm23010-201ENSMUST00000104151 126 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Gm22713-201ENSMUST00000116895 130 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Gm12372-201ENSMUST00000121654 768 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Gm6182-201ENSMUST00000156439 1208 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Gm22731-201ENSMUST00000158086 94 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Gm22944-201ENSMUST00000158662 133 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Gm24229-201ENSMUST00000158830 118 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Traj60-201ENSMUST00000167781 54 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Mir7017-201ENSMUST00000184894 62 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Mir3961-201ENSMUST00000198795 59 ntBASIC0.96□□□□□ -2.26
Trem3Q9JKE1 Gm45344-201ENSMUST00000211610 341 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms