Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Mdga2-203ENSMUST00000113942 423 ntBASIC0.12□□□□□ -2.39
Smco4Q9JIS3 Gm12449-201ENSMUST00000117572 234 ntBASIC0.12□□□□□ -2.39
Smco4Q9JIS3 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.12□□□□□ -2.39
Smco4Q9JIS3 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.12□□□□□ -2.39
Smco4Q9JIS3 Gm24885-201ENSMUST00000158783 270 ntBASIC0.12□□□□□ -2.39
Smco4Q9JIS3 Gm25026-201ENSMUST00000175017 188 ntBASIC0.12□□□□□ -2.39
Smco4Q9JIS3 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.12□□□□□ -2.39
Smco4Q9JIS3 Gm43911-201ENSMUST00000203097 76 ntBASIC0.12□□□□□ -2.39
Smco4Q9JIS3 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.12□□□□□ -2.39
Smco4Q9JIS3 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.12□□□□□ -2.39
Smco4Q9JIS3 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.12□□□□□ -2.39
Smco4Q9JIS3 Gm22299-201ENSMUST00000082663 136 ntBASIC0.12□□□□□ -2.39
Smco4Q9JIS3 Mir221-201ENSMUST00000083488 95 ntBASIC0.12□□□□□ -2.39
Smco4Q9JIS3 Gm5670-201ENSMUST00000093546 372 ntBASIC0.12□□□□□ -2.39
Smco4Q9JIS3 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
Smco4Q9JIS3 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC0.11□□□□□ -2.39
Smco4Q9JIS3 Gm12392-201ENSMUST00000118014 938 ntBASIC0.11□□□□□ -2.39
Smco4Q9JIS3 Gm12550-201ENSMUST00000118478 329 ntBASIC0.11□□□□□ -2.39
Smco4Q9JIS3 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Smco4Q9JIS3 Gm21744-201ENSMUST00000178403 662 ntBASIC0.11□□□□□ -2.39
Smco4Q9JIS3 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
Smco4Q9JIS3 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Smco4Q9JIS3 Gm46993-201ENSMUST00000220708 259 ntBASIC0.11□□□□□ -2.39
Smco4Q9JIS3 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.11□□□□□ -2.39
Smco4Q9JIS3 Gm24258-201ENSMUST00000083739 133 ntBASIC0.11□□□□□ -2.39
Smco4Q9JIS3 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.1□□□□□ -2.39
Smco4Q9JIS3 Gm23381-201ENSMUST00000157676 94 ntBASIC0.1□□□□□ -2.39
Smco4Q9JIS3 Mir6365-201ENSMUST00000183990 101 ntBASIC0.1□□□□□ -2.39
Smco4Q9JIS3 Gm29011-201ENSMUST00000191059 712 ntBASIC0.1□□□□□ -2.39
Smco4Q9JIS3 Gm42719-201ENSMUST00000197393 355 ntBASIC0.1□□□□□ -2.39
Smco4Q9JIS3 Gm44326-201ENSMUST00000198226 101 ntBASIC0.1□□□□□ -2.39
Smco4Q9JIS3 Gm44828-201ENSMUST00000203745 106 ntBASIC0.1□□□□□ -2.39
Smco4Q9JIS3 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC0.1□□□□□ -2.39
Smco4Q9JIS3 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Smco4Q9JIS3 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.09□□□□□ -2.39
Smco4Q9JIS3 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.39
Smco4Q9JIS3 Gm5583-201ENSMUST00000174328 1519 ntBASIC0.09□□□□□ -2.39
Smco4Q9JIS3 Mir544-201ENSMUST00000103813 78 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Gm12825-201ENSMUST00000120249 563 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Gm14129-201ENSMUST00000122436 291 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Gm23230-201ENSMUST00000157298 133 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Gm24476-201ENSMUST00000157437 131 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Gm25901-201ENSMUST00000158494 130 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Gm24056-201ENSMUST00000158617 146 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Gm20874-201ENSMUST00000178356 663 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Mir3569-201ENSMUST00000185080 58 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Gm45912-201ENSMUST00000210646 543 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Gm24624-201ENSMUST00000082617 164 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Mir33-201ENSMUST00000083531 69 ntBASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC0.09□□□□□ -2.4
Smco4Q9JIS3 Gm14761-201ENSMUST00000121363 262 ntBASIC0.08□□□□□ -2.4
Smco4Q9JIS3 Gm22769-201ENSMUST00000158367 98 ntBASIC0.08□□□□□ -2.4
Smco4Q9JIS3 Gm22075-201ENSMUST00000158599 192 ntBASIC0.08□□□□□ -2.4
Smco4Q9JIS3 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
Smco4Q9JIS3 Mir6240-201ENSMUST00000184281 117 ntBASIC0.08□□□□□ -2.4
Smco4Q9JIS3 Gm28995-201ENSMUST00000186625 261 ntBASIC0.08□□□□□ -2.4
Smco4Q9JIS3 Gm29575-201ENSMUST00000190597 315 ntBASIC0.08□□□□□ -2.4
Smco4Q9JIS3 Mir3087-201ENSMUST00000199405 56 ntBASIC0.08□□□□□ -2.4
Smco4Q9JIS3 Gm42960-201ENSMUST00000202160 241 ntBASIC0.08□□□□□ -2.4
Smco4Q9JIS3 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.08□□□□□ -2.4
Smco4Q9JIS3 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.08□□□□□ -2.4
Smco4Q9JIS3 AC127302.1-201ENSMUST00000215973 1111 ntBASIC0.08□□□□□ -2.4
Smco4Q9JIS3 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.08□□□□□ -2.4
Smco4Q9JIS3 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Smco4Q9JIS3 Gm15861-201ENSMUST00000120979 339 ntBASIC0.07□□□□□ -2.4
Smco4Q9JIS3 Gm15381-201ENSMUST00000121501 1156 ntBASIC0.07□□□□□ -2.4
Smco4Q9JIS3 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Smco4Q9JIS3 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.07□□□□□ -2.4
Smco4Q9JIS3 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC0.07□□□□□ -2.4
Smco4Q9JIS3 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC0.07□□□□□ -2.4
Smco4Q9JIS3 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.07□□□□□ -2.4
Smco4Q9JIS3 Gm24534-201ENSMUST00000157949 291 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm25525-201ENSMUST00000177701 107 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm26178-201ENSMUST00000177706 107 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm26465-201ENSMUST00000178517 107 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm25021-201ENSMUST00000179184 107 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm22995-201ENSMUST00000179670 107 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm24424-201ENSMUST00000179714 107 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm24389-201ENSMUST00000179962 107 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm25672-201ENSMUST00000180111 107 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Mir6364-201ENSMUST00000183396 86 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm29163-201ENSMUST00000188029 107 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm29490-201ENSMUST00000190923 342 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm17937-201ENSMUST00000197908 742 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm44976-201ENSMUST00000205543 261 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm23815-201ENSMUST00000083231 107 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm22971-201ENSMUST00000083305 97 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Gm23520-201ENSMUST00000093736 107 ntBASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
Smco4Q9JIS3 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
Smco4Q9JIS3 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.05□□□□□ -2.4
Smco4Q9JIS3 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Smco4Q9JIS3 Gm15714-201ENSMUST00000117168 250 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms