Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Gm14389-201ENSMUST00000140453 241 ntBASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Gm23956-201ENSMUST00000157211 119 ntBASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Gm23120-201ENSMUST00000157654 287 ntBASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Mir5624-201ENSMUST00000176635 61 ntBASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Gm22448-201ENSMUST00000179254 107 ntBASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Gm18982-201ENSMUST00000198118 529 ntBASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Gm43529-201ENSMUST00000199178 412 ntBASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Gm44959-201ENSMUST00000209127 231 ntBASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Gm45860-201ENSMUST00000212700 334 ntBASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Gm7422-201ENSMUST00000220115 640 ntBASIC3.16□□□□□ -1.9
Copb1Q9JIF7 AC154552.1-201ENSMUST00000222969 202 ntBASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Gm22806-201ENSMUST00000082738 136 ntBASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Gm22353-201ENSMUST00000083918 136 ntBASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Copb1Q9JIF7 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Copb1Q9JIF7 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm14296-202ENSMUST00000108931 750 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm13876-201ENSMUST00000118451 261 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm15029-201ENSMUST00000119742 199 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm13396-201ENSMUST00000120617 271 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm11363-201ENSMUST00000121672 548 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm24736-201ENSMUST00000158862 130 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm24618-201ENSMUST00000177718 94 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm23953-201ENSMUST00000178214 94 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm26332-201ENSMUST00000179813 94 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm22863-201ENSMUST00000180265 94 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm19244-201ENSMUST00000204340 253 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm44594-201ENSMUST00000208982 407 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm45616-201ENSMUST00000211711 319 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Copb1Q9JIF7 Mir701-201ENSMUST00000102208 109 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Defb44-ps-201ENSMUST00000126871 219 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Gm23557-201ENSMUST00000157820 138 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Gm27510-201ENSMUST00000158214 64 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Gm9830-201ENSMUST00000178509 357 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Mir7081-201ENSMUST00000184490 75 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Gm27520-201ENSMUST00000184872 81 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Gm7329-201ENSMUST00000185915 210 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Gm37081-201ENSMUST00000192034 196 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Gm37616-201ENSMUST00000193974 322 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Gm9402-201ENSMUST00000196849 388 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Mir7227-201ENSMUST00000200408 59 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Gm44520-201ENSMUST00000205447 802 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Gm45395-201ENSMUST00000209891 559 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Gm22247-201ENSMUST00000082476 131 ntBASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Copb1Q9JIF7 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Gm13457-201ENSMUST00000117885 267 ntBASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Gm11253-201ENSMUST00000118486 201 ntBASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Gm23409-201ENSMUST00000158516 237 ntBASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Snord93-201ENSMUST00000175580 71 ntBASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.13□□□□□ -1.91
Copb1Q9JIF7 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Gm44964-201ENSMUST00000207011 273 ntBASIC3.13□□□□□ -1.91
Copb1Q9JIF7 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.13□□□□□ -1.91
Copb1Q9JIF7 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Gm9318-201ENSMUST00000222444 438 ntBASIC3.13□□□□□ -1.91
Copb1Q9JIF7 AC239878.2-201ENSMUST00000224048 464 ntBASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Copb1Q9JIF7 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Gm25466-201ENSMUST00000103995 132 ntBASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Gm27926-201ENSMUST00000157180 66 ntBASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Gm25373-201ENSMUST00000158156 115 ntBASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Gm23581-201ENSMUST00000158531 63 ntBASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Gm23053-201ENSMUST00000175136 96 ntBASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Gm43739-201ENSMUST00000198294 307 ntBASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Gm44881-201ENSMUST00000205425 367 ntBASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Gm44844-201ENSMUST00000207242 336 ntBASIC3.12□□□□□ -1.91
Copb1Q9JIF7 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Gm23454-201ENSMUST00000083332 133 ntBASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Copb1Q9JIF7 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Copb1Q9JIF7 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Copb1Q9JIF7 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 152.4 ms