Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Mir7026-201ENSMUST00000184384 67 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm29216-201ENSMUST00000187117 492 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm43114-201ENSMUST00000198298 343 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm44962-201ENSMUST00000206460 279 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm18160-201ENSMUST00000214279 827 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm29809-201ENSMUST00000218423 493 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm24805-201ENSMUST00000082931 104 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm26166-201ENSMUST00000083788 107 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm13439-201ENSMUST00000117541 409 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm15175-201ENSMUST00000117629 132 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm24394-201ENSMUST00000158141 123 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm25836-201ENSMUST00000158918 123 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm16162-201ENSMUST00000162296 297 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm8114-201ENSMUST00000172225 484 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm22716-201ENSMUST00000177596 107 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm25451-201ENSMUST00000177832 121 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm5116-201ENSMUST00000187732 463 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm29627-201ENSMUST00000187984 463 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm28299-201ENSMUST00000189908 339 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm45232-201ENSMUST00000207811 162 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm45654-201ENSMUST00000210980 123 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Lima1Q9ERG0 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Lima1Q9ERG0 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm22761-201ENSMUST00000102278 96 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm14558-201ENSMUST00000117458 381 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm15211-201ENSMUST00000118932 528 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm14530-201ENSMUST00000122391 333 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm23181-201ENSMUST00000158685 110 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm2966-201ENSMUST00000166052 481 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Mir3086-201ENSMUST00000175072 87 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm28466-201ENSMUST00000190678 659 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm25820-202ENSMUST00000197479 128 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm45590-201ENSMUST00000209715 262 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 AC159476.2-201ENSMUST00000216221 418 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.5□□□□□ -2.17
Lima1Q9ERG0 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm22810-201ENSMUST00000082741 158 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm23454-201ENSMUST00000083332 133 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Gm22723-201ENSMUST00000083820 129 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.5□□□□□ -2.17
Lima1Q9ERG0 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Gm25992-201ENSMUST00000102437 109 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Gm14852-201ENSMUST00000120065 647 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Gm22664-201ENSMUST00000158719 105 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Gm2855-201ENSMUST00000166765 456 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Gm24464-201ENSMUST00000179697 107 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Gm27878-201ENSMUST00000184000 106 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Gm18433-201ENSMUST00000192747 197 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Gm36984-201ENSMUST00000192770 235 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Gm37579-201ENSMUST00000194291 142 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Gm46103-201ENSMUST00000217614 341 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Mir29c-201ENSMUST00000083614 88 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Mir148b-201ENSMUST00000083626 97 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Gm23503-201ENSMUST00000083903 107 ntBASIC1.49□□□□□ -2.17
Lima1Q9ERG0 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Gm15714-201ENSMUST00000117168 250 ntBASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Gm12636-201ENSMUST00000117395 624 ntBASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Gm15878-201ENSMUST00000127561 306 ntBASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Gm22963-201ENSMUST00000157960 91 ntBASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Gm24177-201ENSMUST00000158927 131 ntBASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Gm7953-201ENSMUST00000168278 469 ntBASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Gm22290-201ENSMUST00000177655 107 ntBASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Gm22583-201ENSMUST00000178031 107 ntBASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Gm38154-201ENSMUST00000195444 340 ntBASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC1.48□□□□□ -2.17
Lima1Q9ERG0 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.48□□□□□ -2.17
Lima1Q9ERG0 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Lima1Q9ERG0 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm24430-201ENSMUST00000104077 104 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm14835-201ENSMUST00000119039 315 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm23713-201ENSMUST00000157353 70 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm24262-201ENSMUST00000157431 144 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm24198-201ENSMUST00000157812 108 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Gm22615-201ENSMUST00000158102 70 ntBASIC1.47□□□□□ -2.17
Lima1Q9ERG0 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 235.5 ms