Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm7871-201ENSMUST00000195346 618 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm18341-201ENSMUST00000197538 622 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm31230-201ENSMUST00000199725 785 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm45387-201ENSMUST00000209792 632 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.31□□□□□ -2.04
Scn4aQ9ER60 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.31□□□□□ -2.04
Scn4aQ9ER60 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm24268-201ENSMUST00000082990 110 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm26473-201ENSMUST00000116763 127 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm12765-201ENSMUST00000117273 615 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm13457-201ENSMUST00000117885 267 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm17064-201ENSMUST00000167690 452 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm28000-201ENSMUST00000184380 85 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm29263-201ENSMUST00000188718 463 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm28384-201ENSMUST00000189079 463 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm6801-201ENSMUST00000190697 339 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm29950-201ENSMUST00000195273 237 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm9236-201ENSMUST00000196892 587 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm19140-201ENSMUST00000209790 421 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 AC111046.1-201ENSMUST00000217715 412 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Mir452-201ENSMUST00000093629 85 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.3□□□□□ -2.04
Scn4aQ9ER60 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.3□□□□□ -2.04
Scn4aQ9ER60 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Scn4aQ9ER60 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.3□□□□□ -2.04
Scn4aQ9ER60 Gm24911-201ENSMUST00000157292 136 ntBASIC2.3□□□□□ -2.04
Scn4aQ9ER60 Gm26181-201ENSMUST00000157687 106 ntBASIC2.3□□□□□ -2.04
Scn4aQ9ER60 Gm17538-201ENSMUST00000168236 327 ntBASIC2.3□□□□□ -2.04
Scn4aQ9ER60 Gm29550-201ENSMUST00000185543 285 ntBASIC2.3□□□□□ -2.04
Scn4aQ9ER60 Gm37778-201ENSMUST00000191732 190 ntBASIC2.3□□□□□ -2.04
Scn4aQ9ER60 Gm23448-201ENSMUST00000083151 104 ntBASIC2.3□□□□□ -2.04
Scn4aQ9ER60 Gm22452-201ENSMUST00000122804 104 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm20794-201ENSMUST00000177626 628 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm22584-201ENSMUST00000177935 92 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm27028-201ENSMUST00000182303 399 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm28356-202ENSMUST00000187566 858 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm6060-201ENSMUST00000188671 251 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm20885-201ENSMUST00000190192 654 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm36866-201ENSMUST00000193343 657 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm36047-201ENSMUST00000193659 657 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm20857-201ENSMUST00000194766 657 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm20858-201ENSMUST00000195459 657 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm43955-201ENSMUST00000204332 142 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm25257-201ENSMUST00000083907 110 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.29□□□□□ -2.04
Scn4aQ9ER60 Gm14887-201ENSMUST00000119522 663 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm15266-201ENSMUST00000119635 255 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm11357-201ENSMUST00000119758 954 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm16428-201ENSMUST00000121193 723 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm23083-201ENSMUST00000157851 116 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm4076-201ENSMUST00000179230 965 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm27919-201ENSMUST00000185163 107 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm43556-201ENSMUST00000196186 681 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Mir7021-201ENSMUST00000197026 63 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm44472-201ENSMUST00000204922 943 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.28□□□□□ -2.04
Scn4aQ9ER60 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm29184-201ENSMUST00000190038 334 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm15235-201ENSMUST00000200572 194 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm26228-201ENSMUST00000082512 107 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm25080-201ENSMUST00000082526 107 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm25518-201ENSMUST00000083864 107 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm23503-201ENSMUST00000083903 107 ntBASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Scn4aQ9ER60 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Scn4aQ9ER60 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Scn4aQ9ER60 Gm22151-201ENSMUST00000116963 58 ntBASIC2.27□□□□□ -2.05
Scn4aQ9ER60 Gm22733-201ENSMUST00000158094 91 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 121.4 ms