Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.59□□□□□ -2.31
Cpsf1Q9EPU4 Gm33654-201ENSMUST00000221704 215 ntBASIC0.59□□□□□ -2.31
Cpsf1Q9EPU4 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.59□□□□□ -2.31
Cpsf1Q9EPU4 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
Cpsf1Q9EPU4 Gm23299-201ENSMUST00000082708 79 ntBASIC0.59□□□□□ -2.31
Cpsf1Q9EPU4 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC0.59□□□□□ -2.32
Cpsf1Q9EPU4 Gm17154-201ENSMUST00000165748 431 ntBASIC0.58□□□□□ -2.32
Cpsf1Q9EPU4 Mir3086-201ENSMUST00000175072 87 ntBASIC0.58□□□□□ -2.32
Cpsf1Q9EPU4 Gm18357-201ENSMUST00000188184 580 ntBASIC0.58□□□□□ -2.32
Cpsf1Q9EPU4 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC0.58□□□□□ -2.32
Cpsf1Q9EPU4 Gm29573-201ENSMUST00000190291 919 ntBASIC0.58□□□□□ -2.32
Cpsf1Q9EPU4 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Cpsf1Q9EPU4 Gm8940-201ENSMUST00000212585 219 ntBASIC0.58□□□□□ -2.32
Cpsf1Q9EPU4 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC0.58□□□□□ -2.32
Cpsf1Q9EPU4 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.57□□□□□ -2.32
Cpsf1Q9EPU4 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.57□□□□□ -2.32
Cpsf1Q9EPU4 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.57□□□□□ -2.32
Cpsf1Q9EPU4 Mir125b-2-201ENSMUST00000083538 71 ntBASIC0.57□□□□□ -2.32
Cpsf1Q9EPU4 Gm44679-201ENSMUST00000207202 2908 ntBASIC0.57□□□□□ -2.32
Cpsf1Q9EPU4 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.56□□□□□ -2.32
Cpsf1Q9EPU4 Gm22048-201ENSMUST00000104721 89 ntBASIC0.56□□□□□ -2.32
Cpsf1Q9EPU4 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.56□□□□□ -2.32
Cpsf1Q9EPU4 Gm14932-201ENSMUST00000117112 453 ntBASIC0.56□□□□□ -2.32
Cpsf1Q9EPU4 Gm24229-201ENSMUST00000158830 118 ntBASIC0.56□□□□□ -2.32
Cpsf1Q9EPU4 Gm28344-201ENSMUST00000185704 279 ntBASIC0.56□□□□□ -2.32
Cpsf1Q9EPU4 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC0.56□□□□□ -2.32
Cpsf1Q9EPU4 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.56□□□□□ -2.32
Cpsf1Q9EPU4 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.56□□□□□ -2.32
Cpsf1Q9EPU4 CT572985.2-201ENSMUST00000220496 211 ntBASIC0.56□□□□□ -2.32
Cpsf1Q9EPU4 Gm19441-201ENSMUST00000221545 330 ntBASIC0.56□□□□□ -2.32
Cpsf1Q9EPU4 Gm14039-201ENSMUST00000118705 101 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Gm14785-201ENSMUST00000120185 539 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Gm6025-201ENSMUST00000121517 201 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Gm14363-201ENSMUST00000122304 409 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Gm28000-201ENSMUST00000184380 85 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Mir6896-201ENSMUST00000198033 73 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Gm18645-201ENSMUST00000209593 651 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 AC173482.2-201ENSMUST00000224044 750 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Gm24144-201ENSMUST00000082632 111 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Snora41-201ENSMUST00000082668 132 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Gm4732-201ENSMUST00000118778 473 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Gm24908-201ENSMUST00000157294 127 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Gm24060-201ENSMUST00000157494 95 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Igkv1-136-201ENSMUST00000200635 297 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Mir101a-201ENSMUST00000083517 83 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Snord35a-201ENSMUST00000083884 90 ntBASIC0.55□□□□□ -2.32
Cpsf1Q9EPU4 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC0.54□□□□□ -2.32
Cpsf1Q9EPU4 Mir667-201ENSMUST00000102441 92 ntBASIC0.54□□□□□ -2.32
Cpsf1Q9EPU4 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.54□□□□□ -2.32
Cpsf1Q9EPU4 Gm15312-201ENSMUST00000118827 271 ntBASIC0.54□□□□□ -2.32
Cpsf1Q9EPU4 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC0.54□□□□□ -2.32
Cpsf1Q9EPU4 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC0.54□□□□□ -2.32
Cpsf1Q9EPU4 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.54□□□□□ -2.32
Cpsf1Q9EPU4 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC0.54□□□□□ -2.32
Cpsf1Q9EPU4 Gm8403-201ENSMUST00000189712 1298 ntBASIC0.54□□□□□ -2.32
Cpsf1Q9EPU4 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC0.54□□□□□ -2.32
Cpsf1Q9EPU4 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC0.54□□□□□ -2.32
Cpsf1Q9EPU4 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Cpsf1Q9EPU4 Gm20811-201ENSMUST00000190500 553 ntBASIC0.53□□□□□ -2.32
Cpsf1Q9EPU4 Gm36966-201ENSMUST00000192217 413 ntBASIC0.53□□□□□ -2.32
Cpsf1Q9EPU4 Gm18296-201ENSMUST00000192475 783 ntBASIC0.53□□□□□ -2.32
Cpsf1Q9EPU4 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC0.53□□□□□ -2.32
Cpsf1Q9EPU4 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.53□□□□□ -2.32
Cpsf1Q9EPU4 n-R5s50-201ENSMUST00000083168 111 ntBASIC0.53□□□□□ -2.32
Cpsf1Q9EPU4 Gm23969-201ENSMUST00000083324 74 ntBASIC0.53□□□□□ -2.32
Cpsf1Q9EPU4 Gm14884-201ENSMUST00000120456 196 ntBASIC0.52□□□□□ -2.33
Cpsf1Q9EPU4 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Cpsf1Q9EPU4 Gm24837-201ENSMUST00000158683 81 ntBASIC0.52□□□□□ -2.33
Cpsf1Q9EPU4 Gm24086-201ENSMUST00000175171 98 ntBASIC0.52□□□□□ -2.33
Cpsf1Q9EPU4 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC0.52□□□□□ -2.33
Cpsf1Q9EPU4 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Cpsf1Q9EPU4 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Cpsf1Q9EPU4 Gm26176-201ENSMUST00000083795 105 ntBASIC0.52□□□□□ -2.33
Cpsf1Q9EPU4 Gm22759-201ENSMUST00000102276 96 ntBASIC0.51□□□□□ -2.33
Cpsf1Q9EPU4 Gm12417-201ENSMUST00000119153 403 ntBASIC0.51□□□□□ -2.33
Cpsf1Q9EPU4 Gm14731-201ENSMUST00000119216 376 ntBASIC0.51□□□□□ -2.33
Cpsf1Q9EPU4 Gm23170-201ENSMUST00000157158 106 ntBASIC0.51□□□□□ -2.33
Cpsf1Q9EPU4 Gm24747-201ENSMUST00000157835 87 ntBASIC0.51□□□□□ -2.33
Cpsf1Q9EPU4 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.51□□□□□ -2.33
Cpsf1Q9EPU4 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
Cpsf1Q9EPU4 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Cpsf1Q9EPU4 Gm20058-201ENSMUST00000186939 284 ntBASIC0.51□□□□□ -2.33
Cpsf1Q9EPU4 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Cpsf1Q9EPU4 AC132104.1-201ENSMUST00000213615 260 ntBASIC0.51□□□□□ -2.33
Cpsf1Q9EPU4 AC154262.1-201ENSMUST00000225976 286 ntBASIC0.51□□□□□ -2.33
Cpsf1Q9EPU4 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Cpsf1Q9EPU4 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC0.5□□□□□ -2.33
Cpsf1Q9EPU4 Gm14800-201ENSMUST00000122084 1272 ntBASIC0.5□□□□□ -2.33
Cpsf1Q9EPU4 Gm23752-201ENSMUST00000157584 115 ntBASIC0.5□□□□□ -2.33
Cpsf1Q9EPU4 Gm3025-201ENSMUST00000163454 489 ntBASIC0.5□□□□□ -2.33
Cpsf1Q9EPU4 Gm3111-201ENSMUST00000167426 490 ntBASIC0.5□□□□□ -2.33
Cpsf1Q9EPU4 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC0.5□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms