Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.81□□□□□ -2.12
Cdc40Q9DC48 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.81□□□□□ -2.12
Cdc40Q9DC48 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.81□□□□□ -2.12
Cdc40Q9DC48 Gm25124-201ENSMUST00000083345 164 ntBASIC1.81□□□□□ -2.12
Cdc40Q9DC48 Mir300-201ENSMUST00000083485 79 ntBASIC1.81□□□□□ -2.12
Cdc40Q9DC48 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Cdc40Q9DC48 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Cdc40Q9DC48 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Cdc40Q9DC48 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.81□□□□□ -2.12
Cdc40Q9DC48 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm15215-201ENSMUST00000117773 489 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm13903-201ENSMUST00000120945 193 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm12639-201ENSMUST00000121400 493 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Mir1942-201ENSMUST00000157274 63 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm23713-201ENSMUST00000157353 70 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm22615-201ENSMUST00000158102 70 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm25658-201ENSMUST00000158472 128 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm9593-201ENSMUST00000166034 469 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm23144-201ENSMUST00000180226 107 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm38154-201ENSMUST00000195444 340 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm44449-201ENSMUST00000203610 153 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm45386-201ENSMUST00000210194 218 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Gm24490-201ENSMUST00000083803 98 ntBASIC1.8□□□□□ -2.12
Cdc40Q9DC48 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm23109-201ENSMUST00000116867 126 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm15067-201ENSMUST00000119534 156 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm14049-201ENSMUST00000121009 636 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm25784-201ENSMUST00000122524 81 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm15878-201ENSMUST00000127561 306 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm25706-201ENSMUST00000157828 247 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm23043-201ENSMUST00000157890 109 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm22733-201ENSMUST00000158094 91 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm27722-201ENSMUST00000183908 76 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm27443-201ENSMUST00000184660 98 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm42925-201ENSMUST00000197359 285 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm44408-201ENSMUST00000200205 66 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm45296-201ENSMUST00000209625 205 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm45654-201ENSMUST00000210980 123 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 AC162934.3-201ENSMUST00000223015 841 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
Cdc40Q9DC48 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Cdc40Q9DC48 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm11935-201ENSMUST00000118608 399 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm14785-201ENSMUST00000120185 539 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.78□□□□□ -2.12
Cdc40Q9DC48 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm23124-201ENSMUST00000157650 107 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm22389-201ENSMUST00000158193 301 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm23352-201ENSMUST00000158428 64 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm24770-201ENSMUST00000158505 92 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Mir669n-201ENSMUST00000158636 54 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm15914-201ENSMUST00000161922 309 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm44938-201ENSMUST00000208614 427 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Gm25698-201ENSMUST00000082897 107 ntBASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Cdc40Q9DC48 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Gm15211-201ENSMUST00000118932 528 ntBASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Gm14887-201ENSMUST00000119522 663 ntBASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Gm23429-201ENSMUST00000122486 149 ntBASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Gm26424-201ENSMUST00000122530 104 ntBASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Gm16328-201ENSMUST00000126985 196 ntBASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Gm25243-201ENSMUST00000174912 207 ntBASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Gm24168-201ENSMUST00000178825 107 ntBASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Gm27979-201ENSMUST00000185126 56 ntBASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.77□□□□□ -2.13
Cdc40Q9DC48 Gm44533-201ENSMUST00000207782 268 ntBASIC1.77□□□□□ -2.13
Cdc40Q9DC48 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms