Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Gm15115-201ENSMUST00000121145 264 ntBASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Snord11-201ENSMUST00000158468 84 ntBASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Gm25711-201ENSMUST00000158633 128 ntBASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Gm25365-201ENSMUST00000158852 121 ntBASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Gm25156-201ENSMUST00000179809 79 ntBASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Mir7241-201ENSMUST00000184532 64 ntBASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Gm44609-201ENSMUST00000207157 460 ntBASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Gm46993-201ENSMUST00000220708 259 ntBASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Mir320-201ENSMUST00000083594 82 ntBASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Gm23848-201ENSMUST00000083826 106 ntBASIC1.54□□□□□ -2.16
Ccdc3Q9D6Y1 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gm13714-201ENSMUST00000117313 221 ntBASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gm12512-201ENSMUST00000119620 217 ntBASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gm24839-201ENSMUST00000122602 107 ntBASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gm23956-201ENSMUST00000157211 119 ntBASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gm22603-201ENSMUST00000157603 96 ntBASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gm24222-201ENSMUST00000158834 93 ntBASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gm28058-201ENSMUST00000186421 264 ntBASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gm18775-201ENSMUST00000190763 586 ntBASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gm38213-201ENSMUST00000193203 173 ntBASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gm17911-201ENSMUST00000210806 877 ntBASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.53□□□□□ -2.16
Ccdc3Q9D6Y1 Gm26002-201ENSMUST00000101915 107 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Mdga2-203ENSMUST00000113942 423 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm25317-201ENSMUST00000116824 129 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm15714-201ENSMUST00000117168 250 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm15211-201ENSMUST00000118932 528 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm14852-201ENSMUST00000120065 647 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm16412-201ENSMUST00000121602 273 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm24379-201ENSMUST00000122695 86 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm15878-201ENSMUST00000127561 306 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm23078-201ENSMUST00000157848 148 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm10177-202ENSMUST00000161698 207 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm3221-201ENSMUST00000164869 440 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm17154-201ENSMUST00000165748 431 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm2855-201ENSMUST00000166765 456 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm8114-201ENSMUST00000172225 484 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm28956-201ENSMUST00000189047 427 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Mir703-201ENSMUST00000197105 109 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ccdc3Q9D6Y1 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Gm24784-201ENSMUST00000157640 62 ntBASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Gm24837-201ENSMUST00000158683 81 ntBASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Gm27248-201ENSMUST00000184004 166 ntBASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Mir7665-201ENSMUST00000184907 63 ntBASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Gm43911-201ENSMUST00000203097 76 ntBASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Gm44011-201ENSMUST00000203336 394 ntBASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Gm23246-201ENSMUST00000083371 67 ntBASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Mir350-201ENSMUST00000083639 99 ntBASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ccdc3Q9D6Y1 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Gm26147-201ENSMUST00000104479 114 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Gm25958-201ENSMUST00000175114 71 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Gm19932-201ENSMUST00000177033 313 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Mir6351-201ENSMUST00000183826 99 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Gm9236-201ENSMUST00000196892 587 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Snord43-201ENSMUST00000199549 108 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Gm43406-201ENSMUST00000200356 334 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Gm44254-201ENSMUST00000204184 322 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 Gm45730-201ENSMUST00000212560 395 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 AC192334.2-201ENSMUST00000223087 1091 ntBASIC1.5□□□□□ -2.17
Ccdc3Q9D6Y1 AC154424.1-201ENSMUST00000225883 799 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 364.7 ms