Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Gm13439-201ENSMUST00000117541 409 ntBASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Gm9059-201ENSMUST00000118319 183 ntBASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Gm14843-201ENSMUST00000119596 212 ntBASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Gm14402-201ENSMUST00000122217 508 ntBASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Gm23326-201ENSMUST00000157419 105 ntBASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Gm22263-201ENSMUST00000180060 104 ntBASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Mir6355-201ENSMUST00000183687 106 ntBASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Gm19777-201ENSMUST00000191940 358 ntBASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Gm32222-201ENSMUST00000203296 298 ntBASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Gm44654-201ENSMUST00000208052 329 ntBASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Gm25764-201ENSMUST00000104092 134 ntBASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Gm13761-201ENSMUST00000117238 807 ntBASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Gm12550-201ENSMUST00000118478 329 ntBASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Gm6762-201ENSMUST00000121769 289 ntBASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Gm16038-201ENSMUST00000159317 193 ntBASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Gm44337-201ENSMUST00000196553 114 ntBASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Gm44084-201ENSMUST00000203947 409 ntBASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Gm44811-201ENSMUST00000209120 228 ntBASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Gm24533-201ENSMUST00000083138 196 ntBASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.38□□□□□ -1.87
Ddx56Q9D0R4 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Gm12458-201ENSMUST00000119387 495 ntBASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Gm12276-201ENSMUST00000121709 301 ntBASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Gm16362-201ENSMUST00000135189 214 ntBASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Gm16358-201ENSMUST00000146046 210 ntBASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Gm26186-201ENSMUST00000157689 125 ntBASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Gm38311-201ENSMUST00000192945 165 ntBASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Gm44909-201ENSMUST00000208756 165 ntBASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Gm23453-201ENSMUST00000083326 106 ntBASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Gm25512-201ENSMUST00000083863 107 ntBASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ddx56Q9D0R4 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Gm22843-201ENSMUST00000157710 134 ntBASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Gm23779-201ENSMUST00000157938 64 ntBASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Gm25956-201ENSMUST00000175115 217 ntBASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Gm23190-201ENSMUST00000180307 64 ntBASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Gm27640-201ENSMUST00000184580 147 ntBASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Gm29397-201ENSMUST00000185205 333 ntBASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Gm43600-201ENSMUST00000202134 223 ntBASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Gm25199-201ENSMUST00000083095 104 ntBASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.36□□□□□ -1.87
Ddx56Q9D0R4 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Gm15799-201ENSMUST00000120899 289 ntBASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Gm26020-201ENSMUST00000122729 183 ntBASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Gm15733-201ENSMUST00000132957 242 ntBASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Gm21978-201ENSMUST00000179696 377 ntBASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Gm28288-201ENSMUST00000191019 214 ntBASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Gm37338-201ENSMUST00000191986 127 ntBASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Gm42570-201ENSMUST00000195937 292 ntBASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Gm44063-201ENSMUST00000203307 376 ntBASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Gm23412-201ENSMUST00000083017 107 ntBASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ddx56Q9D0R4 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Gm24671-201ENSMUST00000104159 158 ntBASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Mir1198-201ENSMUST00000116995 121 ntBASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Gm13378-201ENSMUST00000117483 336 ntBASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Gm25977-201ENSMUST00000158697 85 ntBASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Gm17100-201ENSMUST00000168963 272 ntBASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Gm27374-201ENSMUST00000183660 81 ntBASIC3.34□□□□□ -1.87
Ddx56Q9D0R4 Mir8096-201ENSMUST00000184526 127 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms