Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC2.45□□□□□ -2.02
Smc1aQ9CU62 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm24268-201ENSMUST00000082990 110 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm25507-201ENSMUST00000116981 144 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm14362-201ENSMUST00000121679 273 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm15254-201ENSMUST00000149567 273 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm22038-201ENSMUST00000157277 242 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm23124-201ENSMUST00000157650 107 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm24393-201ENSMUST00000158135 97 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm22535-201ENSMUST00000158174 119 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm22851-201ENSMUST00000178741 94 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm25074-201ENSMUST00000178782 94 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm28399-201ENSMUST00000186221 318 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm28572-201ENSMUST00000187444 318 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm28437-201ENSMUST00000190277 783 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm37869-201ENSMUST00000193385 595 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Smc1aQ9CU62 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.44□□□□□ -2.02
Smc1aQ9CU62 AL935138.1-201ENSMUST00000215309 196 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Smc1aQ9CU62 AC167192.1-201ENSMUST00000225908 139 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Smc1aQ9CU62 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Gm8858-201ENSMUST00000118259 342 ntBASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Gm22803-201ENSMUST00000158049 283 ntBASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Mir6376-201ENSMUST00000185149 131 ntBASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Gm27919-201ENSMUST00000185163 107 ntBASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Gm44024-201ENSMUST00000203008 476 ntBASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Gm44011-201ENSMUST00000203336 394 ntBASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Gm18453-201ENSMUST00000208000 626 ntBASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Gm7692-201ENSMUST00000213534 409 ntBASIC2.43□□□□□ -2.02
Smc1aQ9CU62 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.43□□□□□ -2.02
Smc1aQ9CU62 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.43□□□□□ -2.02
Smc1aQ9CU62 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Gm13903-201ENSMUST00000120945 193 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Gm23048-201ENSMUST00000157237 129 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Gm25368-201ENSMUST00000158847 131 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Mir6905-201ENSMUST00000184228 70 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Mir3569-201ENSMUST00000185080 58 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Gm28404-201ENSMUST00000190242 453 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Gm38041-201ENSMUST00000194445 661 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Gm9236-201ENSMUST00000196892 587 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Gm44181-201ENSMUST00000203106 483 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Gm22572-201ENSMUST00000082985 105 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Gm23454-201ENSMUST00000083332 133 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Gm26108-201ENSMUST00000083973 191 ntBASIC2.42□□□□□ -2.02
Smc1aQ9CU62 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Gm13439-201ENSMUST00000117541 409 ntBASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Gm14766-201ENSMUST00000121689 367 ntBASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Gm15077-201ENSMUST00000122344 362 ntBASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Gm22073-201ENSMUST00000122668 189 ntBASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Gm22037-201ENSMUST00000157280 296 ntBASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Gm16326-201ENSMUST00000162843 414 ntBASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Gm27991-201ENSMUST00000184804 137 ntBASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Gm29950-201ENSMUST00000195273 237 ntBASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Gm18991-201ENSMUST00000209225 746 ntBASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Gm9318-201ENSMUST00000222444 438 ntBASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Mir222-201ENSMUST00000083537 79 ntBASIC2.41□□□□□ -2.02
Smc1aQ9CU62 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms